| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2801 |
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| Symbol | |
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| ID | 8133754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3172856 |
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| End bp | 3173866 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644866089 |
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| Product | putative semialdehyde dehydrogenase |
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| Protein accession | YP_003018367 |
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| Protein GI | 253689177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
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| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.778935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACG GCTGGAATAT TGCTCTACTG GGTGCCACGG GCGCAGTAGG CACGGCGTTA
CTGGAATTAT TGCAGGAACG CGAATTCCCG GTGGGTGAAC TGTATCTGCT GGCCAGCGAA
CGTAGCGCGG GTGAAACCAT ACGTTTTAAC GGCCAGTCCT GTCTGGTCAC CGATGTGGCT
GATTTTGACT GGTCACAGGC ACAGCTGGCG TTTTTTGTCG CCGGCCAGGA TGTCAGCGCC
CGCTATGCAG AAGAAGCAGG GAATGCAGGC TGTCTGGTTA TCGACAGCAG CGGTCTGTTT
GCGCTGGAGC CGGATGTCCC GCTGGTCGTG CCCGGCGTTA ATGCACATAC GCTGGCAGAT
TACCGTAACC GTAATATTGT TGCGGTGGCC GACAGTCTGA CCAGCCAACT GCTGACGGCG
ATTAAACCGC TGACCGATGC GGCAGGGCTT TCACGCCTTC ATGTCGTCAA TATGCTGGCG
GTTTCCGCCC TCGGCAAAGC GGCGGTAGAC GATCTGGCTG GGCAAAGTGC GCGTTTGCTG
AACGGCATTC CGCCAGAAGC CGGGATTTTC CCGAAACAGC TGGCGTTCAA TCTGTTGCCT
TTACTACCGG ATGAAGCCGG CAGCGTACGT GAAGAACGTC GTCTGGTGGA TCAGGTGCGT
AAAGTCTTGC AGGACGAAGG ATTGCCGATT TCAGTGACCT GCATCCAGTC TCCTGTGTTC
TATGGACACG CGCAGGTTGT CCATCTTGAA TCGCTGCGTC CGCTGTCTGC GGAAGAAGCT
CGCGATGAAC TGCTCAATGC TGGAAATATT GAAGTTAGTG ACGAACAGGA TTACCCGACG
CAGGTCGGTG ATGCGTCCGG CAATGGACAA CTGAGCGTCG GCTGTCTGCG TAACGATTAC
GGGATTCCTG AACTGCTGCA ATTCTGGTCG GTTGCTGATA ATGCTCGTTT TGGCGGTGCG
CTGATGGCGG TTGAAACGGC AGAATGTCTG GTGCGGGAGT ATCTCGGGTA A
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| Protein sequence | MSDGWNIALL GATGAVGTAL LELLQEREFP VGELYLLASE RSAGETIRFN GQSCLVTDVA
DFDWSQAQLA FFVAGQDVSA RYAEEAGNAG CLVIDSSGLF ALEPDVPLVV PGVNAHTLAD
YRNRNIVAVA DSLTSQLLTA IKPLTDAAGL SRLHVVNMLA VSALGKAAVD DLAGQSARLL
NGIPPEAGIF PKQLAFNLLP LLPDEAGSVR EERRLVDQVR KVLQDEGLPI SVTCIQSPVF
YGHAQVVHLE SLRPLSAEEA RDELLNAGNI EVSDEQDYPT QVGDASGNGQ LSVGCLRNDY
GIPELLQFWS VADNARFGGA LMAVETAECL VREYLG
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