Gene PC1_2775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2775 
Symbol 
ID8133728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3149164 
End bp3149763 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content53% 
IMG OID644866063 
Producthypothetical protein 
Protein accessionYP_003018341 
Protein GI253689151 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGA GCCACTTTTT CGCCCACTTA TCTCGTCTAA AACTCATCAG CCGCTGGCCG 
CTCATGCGTA ATGTGCGCAC GGAAAACGTC TCCGAGCACA GCCTTCAGGT TGCGTTTGTC 
GCGCACGCGC TGGCGGTCAT CAAAAACCGC AAATTCGAGG GTAACCTGAA CGCAGAACGC 
ATCGCGCTTC TGGCGATGTA TCACGATGCC AGCGAGGTGC TGACCGGCGA CATGCCGACG 
CCAATCAAGT ACTACAACGC GCAGATCGCG CATGAGTACA AGAAAATAGA GAAGATTGCG 
CAGCAGAAAC TGGTTGAGAT GTTACCGGAA GAACTCCAGC AGGATTATCG GATGCTGCTG 
GACGACAGCT ACACCAGTGA AGAAGAACGC GCCATCGTTA AGCAGGCCGA CGCGCTCTGT 
GCCTACCTGA AGTGTCTGGA AGAATTATCC GCAGGAAATG CAGAGTTCAC GCTGGCCAAA 
GCGCGGTTGG AAAAAACATT GCAGCTGCGC CACAGCCCGG AAATGGACTA TTTCATGACA 
GTCTTTGTTC CCAGCTTTAG CCTGTCGCTC GACGAAATCA GCCAAGACTC TCCGTTATAA
 
Protein sequence
MNQSHFFAHL SRLKLISRWP LMRNVRTENV SEHSLQVAFV AHALAVIKNR KFEGNLNAER 
IALLAMYHDA SEVLTGDMPT PIKYYNAQIA HEYKKIEKIA QQKLVEMLPE ELQQDYRMLL 
DDSYTSEEER AIVKQADALC AYLKCLEELS AGNAEFTLAK ARLEKTLQLR HSPEMDYFMT 
VFVPSFSLSL DEISQDSPL