| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2762 |
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| Symbol | |
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| ID | 8133715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3133622 |
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| End bp | 3135469 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866050 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_003018328 |
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| Protein GI | 253689138 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTAC TCTATTTAAC AATACTCTTC CCGCTGCTCG GCTTTCTGTT GCTGGCATTT
TCCCGCGGTC GCTGGTCGGA AAATACGTCC GCGACCGTCG GTGTTGGCTC GATTGGTCTG
GCAGCGTTGG TTACCGCTTG GGTTGTGGTC GATTTCATGG GCCAACAGCA CGGCGGCGTC
ACCTTCTTTA ATCAGCATTT GTGGACATGG ATGGCCGTGG GTAATTTCGA CATCAGCGTA
ACGCTGACGC TCGATGGTCT TGCGGTGACA ATGCTGTCCG TGGTTACGGG CGTCGGCTTC
TTTATTCACC TGTTTGCCTC CTGGTACATG CGTGGGGAAG AGGGATATTC CCGCTTCTTC
GCCTACACCA ACCTGTTTAT CGCGAGTATG GTCGTTCTGG TACTGGCAGA TAACCTGTTG
CTGATGTATC TCGGTTGGGA AGGGGTGGGG CTGTGCAGTT ACCTGCTGAT CGGTTTCTAC
TACACCAATC CGAAGAACGG CGCGGCGGCA ATGAAGGCTT TCATCGTTAC GCGTGTAGGT
GACGTCTTCC TGGCTTTTGC TCTGTTCATC CTTTACAAAG AATTGGGTAC GCTCAACTTC
CGCGAGCTAA TGGTATTAGC ACCACAGAAA TTGGCTGAAG GTTCACCGGA AATCACCTGG
GCTACGCTGA TGTTACTGGG TGGTGCGGTC GGTAAATCTG CACAGCTGCC GCTGCAAACC
TGGCTGGCGG ATGCGATGGC TGGCCCAACG CCGGTCTCTG CACTGATCCA CGCCGCTACG
ATGGTTACCG CGGGTGTCTA CCTGATTGCA CGTACCAATG GCCTGTTCCT GATGGCACCG
GATGTCCTGC ATCTGGTGGG TATTGTGGGT GCGGTCACGC TGGTGCTGGC AGGTTTTGCC
GCTCTGGTGC AAACCGACAT CAAACGTGTG CTGGCCTATT CCACCATGAG CCAGATTGGC
TACATGTTCC TGGCGCTGGG CGTTCAGGCA TGGGATGCCG CGATTTTCCA TCTGATGACG
CATGCGTTCT TTAAAGCGCT GCTGTTCCTC TCTTCTGGTT CGGTCATTCT GGCCTGCCAC
CATGAGCAGA ACATCTTCAA GATGGGCGGC CTGCGTAAAA CGATTCCGCT GGTTTATGTC
TGCTTCCTGG TCGGGGGCGC GGCGCTGGCC GCACTGCCGC TGGTTACCGC GGGCTTCTTC
AGTAAAGACG AGATTCTGGC TGGCGCATGG GCCAATGGTC ACATCAATCT GATGGTGGCT
GGATTGGTCG GTGCCTTCAT GACCTCGCTG TATACGTTCC GTATGATTTT CATCGTGTTC
CACGGTGAAG AGAAAACCAA AGCGCATGCA GGAAAAGGCA TTTCTCACCA CTTACCGCTG
GTTGTGCTGA TGGTTCTGTC CACCTTTATT GGTGCGATGA TTGTTCCGCC GTTGCACGGT
GTGTTGCCGG CGACGACTGA GCTTGAACAC GGCCAGTTGA TGACGCTGGA AATTACCTCT
GGCGTGGTGG CGATTGCCGG TATTCTGCTT GCTGCTGTGC TGTGGCTGGG TAAACGTCAG
GCGGTGAGCA GCATCGCGAA GAGTGCTCCG GGTCGTTTCT TCTCGACCTG GTGGTTCCAC
GCGTGGGGCT TCGACTGGTT GTACGACCAT GTCTTTGTTA AACCGTATCT GGCTATCGCG
AAGCTGTTGC AGCGTGATCC GTTAAATGGG CTGATGACCA TCCCGGCTAC GATTACCCGT
TGGGGTAACC GTGGGCTGGC GCTCAGTGCG AATGGTCAAT TGCGCTGGTA CGTTGCTTCT
ATGGGCTTTG GTGCCGTGCT GGTGCTGGCC TTGTTGCTGC TGGTGTAA
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| Protein sequence | MNLLYLTILF PLLGFLLLAF SRGRWSENTS ATVGVGSIGL AALVTAWVVV DFMGQQHGGV
TFFNQHLWTW MAVGNFDISV TLTLDGLAVT MLSVVTGVGF FIHLFASWYM RGEEGYSRFF
AYTNLFIASM VVLVLADNLL LMYLGWEGVG LCSYLLIGFY YTNPKNGAAA MKAFIVTRVG
DVFLAFALFI LYKELGTLNF RELMVLAPQK LAEGSPEITW ATLMLLGGAV GKSAQLPLQT
WLADAMAGPT PVSALIHAAT MVTAGVYLIA RTNGLFLMAP DVLHLVGIVG AVTLVLAGFA
ALVQTDIKRV LAYSTMSQIG YMFLALGVQA WDAAIFHLMT HAFFKALLFL SSGSVILACH
HEQNIFKMGG LRKTIPLVYV CFLVGGAALA ALPLVTAGFF SKDEILAGAW ANGHINLMVA
GLVGAFMTSL YTFRMIFIVF HGEEKTKAHA GKGISHHLPL VVLMVLSTFI GAMIVPPLHG
VLPATTELEH GQLMTLEITS GVVAIAGILL AAVLWLGKRQ AVSSIAKSAP GRFFSTWWFH
AWGFDWLYDH VFVKPYLAIA KLLQRDPLNG LMTIPATITR WGNRGLALSA NGQLRWYVAS
MGFGAVLVLA LLLLV
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