Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2761 |
Symbol | |
ID | 8133714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3131986 |
End bp | 3133521 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644866049 |
Product | NADH dehydrogenase subunit M |
Protein accession | YP_003018327 |
Protein GI | 253689137 |
COG category | [C] Energy production and conversion |
COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTACTAC CTTGGCTAAT TCTTCTCCCC TTTATCGGCG GTCTGCTGTG CTGGCAGTTA GAGCGTTTTG GTACGAAAGT ACCGCGCTGG ATAGCGTTGA TTGCAATGGG GCTGACACTC GCACTGTCTC TGCAACTGTG GTTGCAAGGC GGTTACTCAC TGACCGCGCC GACAGGCGTG CCACAATGGC AATCCGAGTT TTATGTGCCG TGGATCCCGC GCTTCGGCAT CGGTATCCAT CTTGCATTGG ATGGCCTGTC GCTGCTGATG GTGGTGCTGA CGGGGTTGCT GGGCGTGTTG GCAATCCTCT GTTCCTGGAA TGAAATTCAG CGCTATCAGG GCTTCTTCCA CCTGAACCTG CTGTGGATTC TGGGCGGCGT TATCGGCGTG TTCCTTGCCA TCGACATGTT CCTGTTCTTC TTCTTCTGGG AAATGATGCT GGTACCAATG TACTTCCTGA TTGCACTGTG GGGGCATAAA GGCTCTGACG GTAAAACCAG AATTACGGCG GCGACCAAGT TCTTCATTTA TACCCAGGCA AGTGGCCTGA TCATGTTGAT TGCGATTCTG GCGCTGGTCT TTGTGCATCA CAATGCCACC GGTGTCTGGA CGTTCAACTA TGAAGACCTG CTGAAGACGC CGATGTCGTA TGGTGTTGAA TATCTGTTGA TGCTGGGCTT CTTCATCGCG TTTGCTGTAA AAATGCCTGT TGTGCCGTTG CACGGCTGGC TACCGGATGC ACACAGCCAG GCTCCAACCG CAGGTTCTGT TGACCTGGCG GGGATCCTGT TGAAAACGGC GGCCTACGGT CTGCTGCGTT TCAGCCTGCC GCTGTTCCCG AATGCCTCCC ATGCCTTTGC ACCGATTGCC ATGTGGCTGG GTGTGATTGG TATCTTCTAC GGTGCCTGGT TGGCCTTTAA ACAGACTGAC ATCAAACGCC TGATCGCTTA CACCTCGGTG TCCCACATGG GCTTCGTCAT GATTGCCATC TATTCCGGTA ATCAACTGGC TTATCAGGGC GCAGTGATTC AGATGATTGC GCACGGCCTG TCCGCTGCCG GTCTGTTTAT TCTGTGCGGT CAACTTTACG AGCGTCTGCA TACTCGTGAC ATGCGTGAAA TGGGCGGCCT GTGGGCGCGT TTGAAATACC TGCCAGCGCT GTCTCTGTTC TTTGCTGTCG CGACGCTGGG GATGCCAGGA ACGGGCAACT TTGTTGGCGA ATTCATGATT CTGTTCGGCA GCTATCAGGT TGTGCCGGTG ATTACGGTGA TCTCAACCTT CGGTCTGGTA TTTGCGTCAG TCTACTCACT GATCATGATG CAGCGTGCTT ACTACGGCGC GCCTAAATCT GATGAGCCAT TGAAGAGTAT GTCGATCCGC GAATTGTCTA TCGTGATGCT GTTGGTGGTA TTACTGGTGT TGTTAGGGGT TTACCCGCAA CCGATTCTGG ATACCTCCAG TGCCGCGATG TCAAATATCC AGCAGTGGTT TATGTCGTCT GCTCCAGATT CAATTATTTC AACAACAAGG CCGTAA
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Protein sequence | MLLPWLILLP FIGGLLCWQL ERFGTKVPRW IALIAMGLTL ALSLQLWLQG GYSLTAPTGV PQWQSEFYVP WIPRFGIGIH LALDGLSLLM VVLTGLLGVL AILCSWNEIQ RYQGFFHLNL LWILGGVIGV FLAIDMFLFF FFWEMMLVPM YFLIALWGHK GSDGKTRITA ATKFFIYTQA SGLIMLIAIL ALVFVHHNAT GVWTFNYEDL LKTPMSYGVE YLLMLGFFIA FAVKMPVVPL HGWLPDAHSQ APTAGSVDLA GILLKTAAYG LLRFSLPLFP NASHAFAPIA MWLGVIGIFY GAWLAFKQTD IKRLIAYTSV SHMGFVMIAI YSGNQLAYQG AVIQMIAHGL SAAGLFILCG QLYERLHTRD MREMGGLWAR LKYLPALSLF FAVATLGMPG TGNFVGEFMI LFGSYQVVPV ITVISTFGLV FASVYSLIMM QRAYYGAPKS DEPLKSMSIR ELSIVMLLVV LLVLLGVYPQ PILDTSSAAM SNIQQWFMSS APDSIISTTR P
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