| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2699 |
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| Symbol | |
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| ID | 8133652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3062285 |
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| End bp | 3063202 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865987 |
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| Product | aminotransferase class IV |
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| Protein accession | YP_003018265 |
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| Protein GI | 253689075 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACCCA CCTTATCCAG CCAAAGCAGT CAGGCTTATT TGCAAGATCC GCGTAACCGC
GACGTACAGG TGTATGTGAA TGGGGAATTT GTTCATCGCG ACAACGCGGT GGTGTCGATC
TTTGATTCCG GCTACGTGTG CGGCGACGGC GTATGGGAAG GCTTGCGTCT GGTTAATGGT
CGCCTGATTG CGCTGGATGC CCATCTCGAT CGCCTGTTTG ACGGCGCTGC CGCGATCCAA
CTGGATATCG GCCATAGCCG GGAAGCGCTG ACTGATATTC TCCATAAAAC GCTTGCCATC
AACGGCATGA CCGATGGCGC GCATATTCGC CTGATGATTA CCCGAGGGAA AAAACATACG
CCAAATCAGG ATCCCCGCTT TATTATCGGC GGTGCCACCA TCGTGTGCGT GGCGGAGTAT
AAGGTCGTCG ATACCGCGGC GAAAAAACGC GGGCTGACGC TGTTTACCTC CACCTACCGC
ACCAGTACGC CAGATGTCTT CGATCTGCGG CTGAATTCGC ACAGTCGGCT CAATCTTATT
CAGGCGCTGC TACAGGCGTT GCAGGCCGGT GCCGATGAGG CACTGATGCT GGATCCACAC
GGTTTTGTCG CCAGCTGTAA CTCCACCAAC TTTTTTATCG TCCGCCGCGG TGAATTGTGG
ACATCATCAG GCCGCTACTG TTTCAACGGC ATTACCCGCC AGACCATTAT CAACCTTGCA
GAGGCCAACG GGCTGAAGGT CAAGACTCAG GATTTTACGC TGGCAGAAGC GCTTACTGCC
GATGAAGCCT TTGTCACCGG CACGCTGGCA GGCATCACCC CGGTAAAAGC GCTGGACGGT
CGCCCGTTTA ACGCCGAACA CCGCCCAGTA ACCGAGCAGC TCAGCCGCTG GTATGAGGCG
TATCTGCACG CGCAGTGA
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| Protein sequence | MQPTLSSQSS QAYLQDPRNR DVQVYVNGEF VHRDNAVVSI FDSGYVCGDG VWEGLRLVNG
RLIALDAHLD RLFDGAAAIQ LDIGHSREAL TDILHKTLAI NGMTDGAHIR LMITRGKKHT
PNQDPRFIIG GATIVCVAEY KVVDTAAKKR GLTLFTSTYR TSTPDVFDLR LNSHSRLNLI
QALLQALQAG ADEALMLDPH GFVASCNSTN FFIVRRGELW TSSGRYCFNG ITRQTIINLA
EANGLKVKTQ DFTLAEALTA DEAFVTGTLA GITPVKALDG RPFNAEHRPV TEQLSRWYEA
YLHAQ
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