| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2690 |
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| Symbol | |
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| ID | 8133643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3053374 |
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| End bp | 3054456 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644865978 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003018256 |
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| Protein GI | 253689066 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGTCA GTCGTTTTGC CTTCTGTCTG CTGTCAGCCC TGCTGCTTAG CGGCTGCGAC
AGCGCCGATG ATTTACCTGC GCCACCGCCC GTCAGGCCGG TGAAAACGCT GGTGGTTATG
CCTGCGATGA ACCGGGAACC CGTGACGTTA ACGGGGGAAG TTCGCCCACA TGAAGAAACG
GCGTTAGGTT TCCGGCTGGA TGGCCGCATC CTTAATCGTC TGGTGGATGT GGGGGCGTCG
GTGAAGCGGG GCGATGTGAT TGCGACGCTC GATGCGCGCG ACAGTGAAAA TCAGCTGCGC
AGCGCGCAGG CGGATTTAGC CAGCGCCATC TCGGCGGAAC GGCTGGCGAA AAGCAACTTT
TCGCGCATGA AGGCGTTGGC ACCGGGCGGT GCTATTGCGC GGGTACAGCT TGATGAAGCG
CAGGCAAACT GGGACGCAGC GGCTTCCCGT CGTGAAAGCG CGCAGGCAAC GGTGAAAGGT
GCGCAGGAAC GCTTCGGCTA TACGCAACTC ACAGCTGCGC AGGACGGCGT CATCACGACG
GTCAGCGCAA ACCCCGGTCA GGTAGTGAGC GCCGGACAAG AAGTGGTGAA GTTGGCCTCT
CTGGGCGGAC GCGATGCGGT GTTTGACGTG CCGGAGCGGC TGGTCAATCA GTCACTTGCC
TCGCGCGTTA TCCGCGTTTC GCTGTTGTCT GAGCCGAGCG TTCAGGCTGA GGGTCGCGTG
CGCGATATCA GTCCGCAAGC CGATCCCGTT ACGCGTACTT TCAGAGTGAG AGTCACGTTG
ACCTCGCCGC CCGCTGCGAT GGTATTGGGT GCCAGCGTGA ATGGCGCGAT ACAGCAGTCC
GATACTGCCG TTATTGAACT GCCCGCTTCT GCGCTCACCC GACAGGGCGA TCAACCTGCT
GTCTATGTCG TGAATTCTGC GACTCAGACG GTACGTTTGC AGCCAGTTAC CGTTGCCCGC
TATAGCGACA CGGCGATCTT CCTTTCCGGA GGACTGGAAC AAGGCGACCG CGTGGTAACC
GCTGGCGTCA GCAAGCTACG GCCGGATGAG AAAATTCGGC TGGATGAAGA GGGGCGTCGC
TAA
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| Protein sequence | MMVSRFAFCL LSALLLSGCD SADDLPAPPP VRPVKTLVVM PAMNREPVTL TGEVRPHEET
ALGFRLDGRI LNRLVDVGAS VKRGDVIATL DARDSENQLR SAQADLASAI SAERLAKSNF
SRMKALAPGG AIARVQLDEA QANWDAAASR RESAQATVKG AQERFGYTQL TAAQDGVITT
VSANPGQVVS AGQEVVKLAS LGGRDAVFDV PERLVNQSLA SRVIRVSLLS EPSVQAEGRV
RDISPQADPV TRTFRVRVTL TSPPAAMVLG ASVNGAIQQS DTAVIELPAS ALTRQGDQPA
VYVVNSATQT VRLQPVTVAR YSDTAIFLSG GLEQGDRVVT AGVSKLRPDE KIRLDEEGRR
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