| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2648 |
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| Symbol | |
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| ID | 8133596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3006995 |
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| End bp | 3007471 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644865931 |
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| Product | Lysozyme |
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| Protein accession | YP_003018214 |
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| Protein GI | 253689024 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.010454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTACCTG AAGCACTGAA ACAGCGAATT ATTCCCGTCG TTACTGCGTG CGCATTGGCG
ATAGCTACCG TCTTTGTTGG CTTTTTTGAA GGCAAAGAGA ACACCGCTTA CCGTGATATC
GCGGGAGTCT GGACGATTTG CTACGGGCAT ACCGGTGATG TAAAGGCCGG TGACTACAAA
ACAGATGCTG AGTGCGACGC ATTGTTACAG CAGGATTTAA AGCCTGCTTT TCATGCCATC
GATCGGTTAG TTACGGTTCC ACTCAGTGAG TTACAGCGCG CTGCACTGGC AAGTTTTATC
TACAACGTCG GGACGGGTGC ATTTGAGCGT TCGACCCTGC TTAAAAAACT GAACCGTGGT
GATCTCATCG GCGCATGTAA CGAATTACGC CGCTGGAATA AGGCCGCTGG TCAGGTCTGG
CAAGGGTTAA CCAACCGCCG CGAGGCCGAG AGAATGCTAT GTCTGGAAAA GTTATAG
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| Protein sequence | MLPEALKQRI IPVVTACALA IATVFVGFFE GKENTAYRDI AGVWTICYGH TGDVKAGDYK
TDAECDALLQ QDLKPAFHAI DRLVTVPLSE LQRAALASFI YNVGTGAFER STLLKKLNRG
DLIGACNELR RWNKAAGQVW QGLTNRREAE RMLCLEKL
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