| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2619 |
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| Symbol | |
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| ID | 8133567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2986224 |
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| End bp | 2987639 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644865902 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003018185 |
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| Protein GI | 253688995 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.912775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACGAAC TATTGAACGT TAATGAACAG AGAGATAACG ATGAGTTGGA CTACAATCAA
GTCATAACAT CAGAATGGAC GCAATTAATA GCTACAACCT CACAGAAATC TTTTAATCTA
CTACGCGCTA TCTCCGAGCA GAAAGCGTCC GACTTTGCTG ACAAGTTCTA CTCCTACATG
CTCAAAGATC AGGAAGCTTC ACTTTTTCTT TCCAGTCAGC AAGTTCACGA TCGCCTCCAT
GGGTCTATGA GTAAATGGAT AGCAGATATT CTAACGAATA CCGGAGAGCA CCTGGTTGAC
CTAATTAATC ATCAAAAGAA AATTGGCCAG ATTCATGCAC GTATTGGCAT TCCCGTCGAT
TTGGTTGAGC GCGGAGCCCG GCGTCTAAAA TGGCACCTTT ATGAAGACAT TGCGCAGGTC
GCCGAGGATA AAGCGCTGTG TTTTGATGCC ATGCGTTTTG CCTCTATCTC TATGGATATC
GCCATAGAGA TCATGAGTAA AACCTATTCA CAATCGCACG ATCTCGCCGC CAAAAATGAA
GAATCCTATC GGCTATTTTC CATTCTGGAA AATGCCAGCA TGGAAAGAGA GCGTCAGAAC
GCATCGCTAC TCAACTGGGA AAATGCTTTT ATTTTCAGCG TTGCAACAGG TACGCCTCTT
TCCAGCATCC AGGACCTGAG TGATTCAGAG TTCGGTCTGT GGTTTAACCA TAAGGGAAAA
TCCAGTTTCA GTAACATTCA GGGAATACGC ACTATCGCCT CGATCATAAC GGAAACGGAT
GAATATATTC GCGGCTACAG CACTACCGCA CTACTGACGC AGCAGGATTA CGCTCCGCTG
CTTAAAGCAG TCAGAAGTAA GATTTATAAA ATAAATATGC TCTTGGGGTC GCTATTTGAC
GAAGTCCAAA AGCTGGAAAG TGGTAAGGAT ACGTTGACCC TTCTGCTAAA CCGTCGCTTC
CTGCCAACCA TTCTTCGGCA TGAAATATCG CTGGCAATGC ACTCAAGTAC TCCGCTCAGC
ATCGCCATGA TTGATATTGA CCATTTTAAA ACCGTCAATG ACACCTATGG CCATGCTGCT
GGCGATAACA TCCTGAAAAG GATTGCAGAA GTGCTGTATG AAAGTACGAG AAACAGCGAT
TATGTTTTTC GTTACGGCGG AGAAGAATTC ATGATCGTGC TTATTGAGAC GCCCAAAGTC
GCCGCCCACA CCATCATCGA GCGACTGAGA AAGAAAATTC AGGATCACCC TATTCATCTT
CAAAACGGCG AAAGCATTAC AATGACCATA AGTGCAGGTA TCGCCGTGTA CAGCGGTCAT
CCGGATTATG AGTGTCTGAT AAAGGCAGCG GACGATGCAC TCTATCAGGC CAAGGCCAAC
GGCAGAAACA GAATCGAATA CGCGCAAGAG GAATAA
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| Protein sequence | MNELLNVNEQ RDNDELDYNQ VITSEWTQLI ATTSQKSFNL LRAISEQKAS DFADKFYSYM
LKDQEASLFL SSQQVHDRLH GSMSKWIADI LTNTGEHLVD LINHQKKIGQ IHARIGIPVD
LVERGARRLK WHLYEDIAQV AEDKALCFDA MRFASISMDI AIEIMSKTYS QSHDLAAKNE
ESYRLFSILE NASMERERQN ASLLNWENAF IFSVATGTPL SSIQDLSDSE FGLWFNHKGK
SSFSNIQGIR TIASIITETD EYIRGYSTTA LLTQQDYAPL LKAVRSKIYK INMLLGSLFD
EVQKLESGKD TLTLLLNRRF LPTILRHEIS LAMHSSTPLS IAMIDIDHFK TVNDTYGHAA
GDNILKRIAE VLYESTRNSD YVFRYGGEEF MIVLIETPKV AAHTIIERLR KKIQDHPIHL
QNGESITMTI SAGIAVYSGH PDYECLIKAA DDALYQAKAN GRNRIEYAQE E
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