Gene PC1_2601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2601 
Symbol 
ID8133549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2966664 
End bp2967101 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content46% 
IMG OID644865885 
ProductFlgN family protein 
Protein accessionYP_003018168 
Protein GI253688978 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3418] Flagellar biosynthesis/type III secretory pathway chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.284487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATC TGCAATCGAT TCTGGAGCAG CTGCTGCATA ACCTGCGTGA GCTTGATGCT 
GTCATGTCTG ACGAGCAAAC GTTACTTTGC GCGGGGCATA TCAATAGTAT TGCTCTACAA
CAGGTGACGG AGAAAAAAAC CTCTTTGCTG GCAACGATGC AGCATTTGGA AACTCGACGT
CATGACATCG AATCAACGCT TAAGCTGCAA GCACCTTATG ATGGTATTGA AAAGTTGTCT
GCTTACTGGC AGCAGGTTCA AGAGCTAACC AGACGCTTGA ACGATCAGAA TAAGCACAAT
GGTCTTCTGC TGAGTCGGCA TATTGCCTAT ACCAATGAAG CCATCAATAT ACTGAAGCCT
CGTCATGGTC AGGGATTGTA TGGTCCTGAT GGTCAGTCGA AAGGTGTGAC AGTGGGCGGT
AGAAAAATCA CGTTCTAA
 
Protein sequence
MENLQSILEQ LLHNLRELDA VMSDEQTLLC AGHINSIALQ QVTEKKTSLL ATMQHLETRR 
HDIESTLKLQ APYDGIEKLS AYWQQVQELT RRLNDQNKHN GLLLSRHIAY TNEAINILKP
RHGQGLYGPD GQSKGVTVGG RKITF