Gene PC1_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2600 
Symbol 
ID8133548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2966362 
End bp2966658 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content48% 
IMG OID644865884 
Productanti-sigma28 factor FlgM 
Protein accessionYP_003018167 
Protein GI253688977 
COG category[K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.275979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTG ATCGCACCCA GTCACTGAAG CCGGTCAGTC AAGTGCAACA ACGCGAGTCT 
GGCGATATCG CTAAAACCAA ACGCAAACAG GCTGAAGCTC AGTCTGAAGT CAGCGCAACA
CAGGTAAAAC TGAGCGACGC GCAGGCAAAA TTGATGCAGC CTGGTACGCA GGACATCGAC
ATGAACCGTG TTGAAACGCT GAAGCAGGCA ATTCGTGATG GCTCACTTAA AATTGATGCC
GGAAAGATCG CGGATGCATT GCTGAAAGAA ACACAGGATT TTTTAGCAGG TAAGTAA
 
Protein sequence
MSIDRTQSLK PVSQVQQRES GDIAKTKRKQ AEAQSEVSAT QVKLSDAQAK LMQPGTQDID 
MNRVETLKQA IRDGSLKIDA GKIADALLKE TQDFLAGK