Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2574 |
Symbol | fliE |
ID | 8133522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2943378 |
End bp | 2943692 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644865858 |
Product | flagellar hook-basal body protein FliE |
Protein accession | YP_003018141 |
Protein GI | 253688951 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1677] Flagellar hook-basal body protein |
TIGRFAM ID | [TIGR00205] flagellar hook-basal body complex protein FliE |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0254712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGTTC AAGGTATTGA TGGCGTTTTA CAGCAAATGC AGGTCAAAGC CCTGCAGGCA TCTGGTACGC CAATAGCCAG ACCATCGGTA GAACCTGGTT TTGCCAGTGA GTTGAAGGCT GCGATCGATA AGATCAGCGA CACGCAACAG ACGGCTCGTA CGCAGGCTGA AAAATTCACC CTGGGTGTGC CAGGCGTAGC ATTGAATGAT GTAATGGTGG ATTTGCAGAA GTCATCCATT TCAATGCAAA TGGGCATTCA GGTACGTAAT AAACTGGTCT CTGCGTATCA GGAAGTGATG AATATGTCCG TTTGA
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Protein sequence | MSVQGIDGVL QQMQVKALQA SGTPIARPSV EPGFASELKA AIDKISDTQQ TARTQAEKFT LGVPGVALND VMVDLQKSSI SMQMGIQVRN KLVSAYQEVM NMSV
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