| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2535 |
|---|
| Symbol | |
|---|
| ID | 8133481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 2901196 |
|---|
| End bp | 2901618 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644865817 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_003018102 |
|---|
| Protein GI | 253688912 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.240977 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAGA TCAGAGCGAA AGCAGTTTGT CTTTTCCGAA ACCATGGAAA GATTCTGTTA
GCAGAAGGGT ATGACCCTAT AAAAGATGAG CATTACGTGT TGCCGCTCGG TGGTGGCGTC
GATTTTGGCG AATTGTCGCA GGCAGCAGCG GAGAGGGAAG TCCAGGAGGA AATTAGTGCA
GCGACCAAGG ATTTCTCACT GTTAGGCGTT TCAGAGAATA TTTTTTCCTA CAATGGCAAA
CCTGGGCATG AGATTGTCTT TGTTTATGAG GCGCGCTTTC AGGACGAGTC GCTTTACCAG
CAGGAGATTA TCCATGGTAT CGAGACAAAT GGTGTTCCGA TTGTTACCCG CTGGTTTGAT
ATTGATCGGC TGCGGTCAGG GGAAATCAAG TTTTATCCTC ATGGTATAGT GGACATGATC
TAG
|
|---|
| Protein sequence | MQKIRAKAVC LFRNHGKILL AEGYDPIKDE HYVLPLGGGV DFGELSQAAA EREVQEEISA
ATKDFSLLGV SENIFSYNGK PGHEIVFVYE ARFQDESLYQ QEIIHGIETN GVPIVTRWFD
IDRLRSGEIK FYPHGIVDMI
|
|---|
| |