| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2493 |
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| Symbol | |
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| ID | 8133439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2860048 |
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| End bp | 2861502 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644865775 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003018060 |
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| Protein GI | 253688870 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.15789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTCAA ATTATCGCGA GTCGGCATTG CCTGCGCCAG CCGTCAACAC CCCGCCGTGG
CTTGGCCTCT CTGTGCTGCT GATAGCCGGT TTTGTCACGA TCTTCGACCT CTTCGTGGTC
AATGTCGCTA TTCCCAGCAT GCAGGTCGAT CTGGGTGCTA GCTTCGCGCA AATCGGTTTC
ATCGTAGCGG GTTATGAACT GGCTTTCGGC GTACTGCTGA TTACGGGTGG GCGGCTGGGG
GATGTATTTG GTCGACGCCG CCTGTTTGTG GTGGGCATGG CCGGGTTTAC GCTCGCCTCT
GCGCTGTGTG GTTTAGCGCC CAGTGCGGGG TTTCTGATCG GTGCCCGCAT CTTACAGGGA
CTGGCGGCCG CTTTACTGTT TCCACAGGTT TATGCCTCTA TCCGCGTCAA TTTCGACGGT
GATGATAGCC GCCGTGCCTT CGGCCTGCTG GGCATGACGC TAGGGCTCGC CGCTATCGCG
GGTCAGATAC TGGGGGGATG GCTGGTGCAT GCCAATCTGT TCGGGTTGGG CTGGCGCAGT
ATCTTTCTTA TCAATGTACC GATTGGCCTG CTTGCTATCG CCGCAGCACG ATTTATCCCT
GAGTCCCGGA CGCCGCAGCG CCCTTCGCTG GACTGGATGG GCGTGGCGTT GGTCAGCGTT
GGGCTGACGC TGCTGCTGGT GCCGCTGATT GAAGGGCCGG GACAAGGGTG GCCAGAATGG
AGCCTGTGGA TGTTGGCCAC AGCAACGCTC TTGTTAGCGA TGTTTTACCG TCAGCAGGAA
CGTCGACAGC GAGCGGGGCA TCTTCCGCTG GTGGATATGC GTCTGCTCGT ACAGCACCGT
TTCCTGCTGG GTGTGTTGCT GGTGCTGCTG GTGTATTCCA CATCCAGCTC ATTTTTCCTG
TGTTTTGCTT TGCTGGTGCA AACAGGGCTG GGGCTTGATC CTTTCCTTGC CGGAAGTATT
TTCGCGCCGT GCAGCGTGGG TTTCGTTCTG GCATCGCTGG CAGCACCTCA TCTGGTTGCT
CGCTGGGGTA CGGTTGCTAT CGTCGTGGGG GCGCTGGTTT ATGCTGTCTC GATCGGCCTG
TTGATTATGC AGGTGCAGCT AGCGGGGGCC GATCTGGTGG CCGTTCGGCT GATCCCTGTG
TTGGTGGTGG TCGGGGCAGG TCAGGGCTTT ATCATGACGC CGCTGTTAAA TCTGGTCTTG
GGATTTGTGG ATGAGGCTCA GGCGGGTATG GCATCGGGCG TGATCTCGAC GGTTCAGCAG
GTTGGGGCGG CGTTGGGTGT GGCCGTGGTG GGCATCCTGT TTGGTACTGC ACTGGCGACA
GGCGATGACG CAGTTGCACA AGCGGGTCAA TACGTTTCAG CCTTTGTGGC GGGAATTCTC
TACAACCTGA TTGCTGCGCT GCTGGTCTGC ATCCTGTTGC TGATGCTGGT GAGAACGCAG
CGGTCATTCG GTTGA
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| Protein sequence | MNSNYRESAL PAPAVNTPPW LGLSVLLIAG FVTIFDLFVV NVAIPSMQVD LGASFAQIGF
IVAGYELAFG VLLITGGRLG DVFGRRRLFV VGMAGFTLAS ALCGLAPSAG FLIGARILQG
LAAALLFPQV YASIRVNFDG DDSRRAFGLL GMTLGLAAIA GQILGGWLVH ANLFGLGWRS
IFLINVPIGL LAIAAARFIP ESRTPQRPSL DWMGVALVSV GLTLLLVPLI EGPGQGWPEW
SLWMLATATL LLAMFYRQQE RRQRAGHLPL VDMRLLVQHR FLLGVLLVLL VYSTSSSFFL
CFALLVQTGL GLDPFLAGSI FAPCSVGFVL ASLAAPHLVA RWGTVAIVVG ALVYAVSIGL
LIMQVQLAGA DLVAVRLIPV LVVVGAGQGF IMTPLLNLVL GFVDEAQAGM ASGVISTVQQ
VGAALGVAVV GILFGTALAT GDDAVAQAGQ YVSAFVAGIL YNLIAALLVC ILLLMLVRTQ
RSFG
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