Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2491 |
Symbol | |
ID | 8133437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2859019 |
End bp | 2859399 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644865773 |
Product | hypothetical protein |
Protein accession | YP_003018058 |
Protein GI | 253688868 |
COG category | [R] General function prediction only |
COG ID | [COG5633] Predicted periplasmic lipoprotein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.265111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTAACC CGATGCTTTT TCTATCCGCG TGTTTGATCG CCGGACTGCT GGCGGGCTGT AGCACGCCAA AGGTGCTGAC CATCAATGAA CGGCAAACGC TGGTATTGGA TGCCCCCGTG CTGTCGGCGG GCATTACGGC GGGGAATCCG TCGTTGGATT CAGAAAAGGG TCGGCTGCGT GCTTCTTCCG TCGTCAGCAA CGACGCCTCA CAGGCGGTGA CCGTACATTA CCGTTTCTAT TGGTATGATG AAAATGGGCT GGATGTGCTG CCGTTCGAAG ACGTGCAGTC CATTGAACTC CCGCCACAGA CGGAAATGAC GGTGTTTTCA ACGCGCAGTA GTCCCACTGC GCGCCAGGTT CGCCTTCATC TGTTTTTGTA A
|
Protein sequence | MRNPMLFLSA CLIAGLLAGC STPKVLTINE RQTLVLDAPV LSAGITAGNP SLDSEKGRLR ASSVVSNDAS QAVTVHYRFY WYDENGLDVL PFEDVQSIEL PPQTEMTVFS TRSSPTARQV RLHLFL
|
| |