Gene PC1_2491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2491 
Symbol 
ID8133437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2859019 
End bp2859399 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content56% 
IMG OID644865773 
Producthypothetical protein 
Protein accessionYP_003018058 
Protein GI253688868 
COG category[R] General function prediction only 
COG ID[COG5633] Predicted periplasmic lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.265111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAACC CGATGCTTTT TCTATCCGCG TGTTTGATCG CCGGACTGCT GGCGGGCTGT 
AGCACGCCAA AGGTGCTGAC CATCAATGAA CGGCAAACGC TGGTATTGGA TGCCCCCGTG
CTGTCGGCGG GCATTACGGC GGGGAATCCG TCGTTGGATT CAGAAAAGGG TCGGCTGCGT
GCTTCTTCCG TCGTCAGCAA CGACGCCTCA CAGGCGGTGA CCGTACATTA CCGTTTCTAT
TGGTATGATG AAAATGGGCT GGATGTGCTG CCGTTCGAAG ACGTGCAGTC CATTGAACTC
CCGCCACAGA CGGAAATGAC GGTGTTTTCA ACGCGCAGTA GTCCCACTGC GCGCCAGGTT
CGCCTTCATC TGTTTTTGTA A
 
Protein sequence
MRNPMLFLSA CLIAGLLAGC STPKVLTINE RQTLVLDAPV LSAGITAGNP SLDSEKGRLR 
ASSVVSNDAS QAVTVHYRFY WYDENGLDVL PFEDVQSIEL PPQTEMTVFS TRSSPTARQV
RLHLFL