| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2489 |
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| Symbol | |
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| ID | 8133435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2857542 |
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| End bp | 2858435 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865771 |
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| Product | thiamine kinase |
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| Protein accession | YP_003018056 |
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| Protein GI | 253688866 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
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| TIGRFAM ID | [TIGR02721] thiamine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.385558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCCGT TCAGCATTAA GCAGGCAGAT ATCCAGCAAC AGCTGACGGC GGCGATCCAG
AAGCATTTCC CCGCTGTAGA GATAGCGGAT ATTCGCTTTG AGTTGGTTGG TGGGCTAAGT
AGTAAAAGCT GGCGTATTCG TGGCCCGGGT ATCGAATGGC TTGCCCGTCG ACAGTCGCCA
ACCGAGCGGA AGATGGGCGT CGATCGCCAG CGAGAGTTCG CCCTGCTGCG GCGGATGTCC
GCGATAGGGC TTGCGCCACG GCCGCTGCTG TGGCGCGACG ACTGGCTGAT TGTCGAGTGG
GTGCCGGGGC GGATTGCCAC ATCTGATGAG TTCCTGATGA TGCTGGCTAA TGGCGAAGTG
GCGCGTGTCT TGTCTCAGCT TCATCGCCTG CCGCGTAGCG GCCATCCTCT CGATATCAAA
ATGCTATTCG CTCAACACTG GCAACTGATG GATCCGCACC GTCGTTCGCC CGTGCTACTG
CGCGCCCATC ATTATTTTCA GCGAGCGCCA TTGCCCACGC CTTTGGCGCT GGCGCCTCTC
CATCTGGATG TGCATGCTGA AAACCTGCTA ATCACGCCAC AAGGAACGAT GCTGATTGAC
TGGGAATATG CCTCAGATGG CGATATTGCC TTTGAACTGG CGTTCATTGT GCGAGCCAGC
CAGATGGATA GTATGGCGCA AAGGTATTTT CTGCAGAGCT ACCAGAGGCA TCGGCGAGGG
TTTTCCGTGA ACCGCCTTCA GCAACAGATG AGGCAGTGGT TCCCTTGGGT CGATTATCTG
GTATTGATGT GGTTCGAGAT ACGCTGGCAG CAAACGAAGA ACCCCGAATT TTTAGCGGAC
ATTCCCGCGC TCTATCATCG GCTACAATTG GGTCATCGGC TACAGCCAGA CTGA
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| Protein sequence | MAPFSIKQAD IQQQLTAAIQ KHFPAVEIAD IRFELVGGLS SKSWRIRGPG IEWLARRQSP
TERKMGVDRQ REFALLRRMS AIGLAPRPLL WRDDWLIVEW VPGRIATSDE FLMMLANGEV
ARVLSQLHRL PRSGHPLDIK MLFAQHWQLM DPHRRSPVLL RAHHYFQRAP LPTPLALAPL
HLDVHAENLL ITPQGTMLID WEYASDGDIA FELAFIVRAS QMDSMAQRYF LQSYQRHRRG
FSVNRLQQQM RQWFPWVDYL VLMWFEIRWQ QTKNPEFLAD IPALYHRLQL GHRLQPD
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