| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2466 |
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| Symbol | |
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| ID | 8133412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2831719 |
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| End bp | 2832207 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644865748 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_003018033 |
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| Protein GI | 253688843 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.291366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAATCG CGATGATACG TTTACGACAC GCTTTGATTC TCGCCAGCCT TATTTTGGTC
GGCTGTAACA GTAGCCGGCA TAATAATCCG CCGCCGAACG CGCATCTGAG CGATTCGATC
ATGGTGATGG TGCAGCTAAA CGATCAACTG GGACAATGGT ACAGAACGCC TTATCGTTAT
GGCGGGTTGG ATCGTAACGG TGTCGATTGT TCCGGCTTTG TCTACCTGAC GTTCCGCGAT
AAATTTGGCA TGCAGCTGCC GCGTACCACC GAAGAACAAA CCGAATTGGG CGAGCGCATT
GATCGCGAGA ATCTGTTACC AGGCGATTTG GTTTTTTTCA AAACCGGCAG CGGTAGCAGC
GGGTTACACG TCGGTATTTA TGACAAAGAT GACCAGTTTA TTCATGCCTC CACCAGTCAG
GGCGTAATCC GTTCGTCGTT GGATAACGTG TACTGGAAAC GGGCTTACTG GCAGGCTCGC
CGCATCTGA
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| Protein sequence | MVIAMIRLRH ALILASLILV GCNSSRHNNP PPNAHLSDSI MVMVQLNDQL GQWYRTPYRY
GGLDRNGVDC SGFVYLTFRD KFGMQLPRTT EEQTELGERI DRENLLPGDL VFFKTGSGSS
GLHVGIYDKD DQFIHASTSQ GVIRSSLDNV YWKRAYWQAR RI
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