| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2437 |
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| Symbol | |
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| ID | 8133383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2795416 |
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| End bp | 2797053 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644865719 |
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| Product | porin LamB type |
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| Protein accession | YP_003018004 |
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| Protein GI | 253688814 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4580] Maltoporin (phage lambda and maltose receptor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.589746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAAC AAACATCTCT GAAGTTGATA GTTGTGTTGA TTGCCTCAGC GATTGCTTCT
AATAGCGCTA TTGCAGCGAA ATTAACGGTA GAGGAACGGC TGGCTTTACT AGAAAGAGAG
TTGGCCGATA ATAAAAAAGA GCTGCAATCA ACGAAAGCAG AATTGAGAGA GTATAAATCG
ATTGCCCAAC AGCAACAAAT AACTGTAAAA GAAAATATTA ATAAACCAAC AGGAAAGGAA
CGAATTGTTG TTCAGTCTGT TGCTGCATCC CAACCCAACA CATCGGATAA GACACCATCA
GCGGTAGTGG CCAATACACC TTCCTCTGTG CCGGAAAATA GATCGCTAAC GCTGTCTGAT
ATCAGTAAGT ACGTTAAAGA TGATATTGGT TTTACCTATT CTGGGTATTT CCGGGCCGGC
TATGCGACCG CCTCGAATGG TTCACCTGAA GGGTGGGCGC CAGGTGGGTT AGGGCGATTT
GGTAACGAAC ATAATGGCTG GTTTGACTTT ATTTTTAAAC AACGGGTTTA TCAGCAAGGA
GACAAGAGCG CTCATGCGAT AGTTAAGTTA GATGGTGTTG TTGGACAGCA ATATTCCGCA
GGCTGGTTTG GTGAATCGCC GCAAACAGAA AATAGACTTC AATTTTCAGA TCTTTATCTC
ACAACGAAAG GATTCCTACC CGCGTTTCCA GAAGCAGATT TCTGGGTGGG CAAACATGGT
TTGCCTGTTT ATGAAATCCA AATGCTGGAT TGGAAAAGCC ACCGTTCTGG CGTTGGTGCG
GGTGTTGGTA TCGAAAATAT CAATGCGGGT GTAGGGAAAC TAGATGTAGC TCTGACAAGA
GAAGATCTTA ATCTCAGGAA AGTGTCAGAT AACACAACCA AGCAAGCGAA TACCAATACA
GTAGAAGTCC GTTATAAGAA GATTCCACTT TGGGATAAGG CCGATCTCAC ATTTACCGCT
AAATATATGG CAGCAAACAA AAGTGACTCT CAAAAAAGCG GCGAAAGAAG TGGCGAATAT
TTCAAGTTGA AAGATGCTTA CCTTGCGAGT GTGATTCTTA ACCAGAAAAT GAATCCAAAA
GGATTTAATG AATTTACACT CCAGGTTGCG AATAACTCAA TTGCCAGCAA CCTATCGCGC
TACACTAACT CTAACCCCTT TACGGGAGAC GGAGCGTTGC CAACGTATTC TGGTGAACAT
AGTGGTACGG CATTACGCTT GATCTCCCAA GGAGAAATGT ATCTTGCTGA TAATGTCATC
ATGGCTAATG CCTTAGTGTA TACTCAAGGC AGCGATATTT ACAGCCCCTA TACTGGCGCG
CACAGTGACT TTAATAATAT TAGTGGTGCA ATTCGTCCCG CTTATATTTG GAGTAATTAT
AATCAGACTG GCGTTGAACT AGGTTACTTT AATCAGAACA ATAAAGACAA ACTGGGTGTT
AACTATAAGC AGTCTGGCGT CAAAACAACG TTATTCCATA CCATTAAAGT TGATACCAGT
ATGTTGTCAT CTCGACCAGA AATTCGTTTC TATGGTACAT GGTTACGTGT ATTGGATAAT
GAATTAGATA AATTCACATT TAGAGATGAT AAGCAGGACC AGTTAAGTGT AGGCGTTCAG
GCCGAAGTGT GGTGGTAA
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| Protein sequence | MRKQTSLKLI VVLIASAIAS NSAIAAKLTV EERLALLERE LADNKKELQS TKAELREYKS
IAQQQQITVK ENINKPTGKE RIVVQSVAAS QPNTSDKTPS AVVANTPSSV PENRSLTLSD
ISKYVKDDIG FTYSGYFRAG YATASNGSPE GWAPGGLGRF GNEHNGWFDF IFKQRVYQQG
DKSAHAIVKL DGVVGQQYSA GWFGESPQTE NRLQFSDLYL TTKGFLPAFP EADFWVGKHG
LPVYEIQMLD WKSHRSGVGA GVGIENINAG VGKLDVALTR EDLNLRKVSD NTTKQANTNT
VEVRYKKIPL WDKADLTFTA KYMAANKSDS QKSGERSGEY FKLKDAYLAS VILNQKMNPK
GFNEFTLQVA NNSIASNLSR YTNSNPFTGD GALPTYSGEH SGTALRLISQ GEMYLADNVI
MANALVYTQG SDIYSPYTGA HSDFNNISGA IRPAYIWSNY NQTGVELGYF NQNNKDKLGV
NYKQSGVKTT LFHTIKVDTS MLSSRPEIRF YGTWLRVLDN ELDKFTFRDD KQDQLSVGVQ
AEVWW
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