| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2416 |
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| Symbol | |
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| ID | 8133362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2776023 |
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| End bp | 2776892 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644865698 |
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| Product | cytochrome c-type biogenesis protein CcmI |
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| Protein accession | YP_003017983 |
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| Protein GI | 253688793 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.363751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCTAC TGACAGCAAC CATTGTGCTA TCGCTGATTG CGCTTTCTGC GCTGCTGCTT
GCGCCGTGGT CGTCACGGGG CGAATGCGAT CGTGATGCGA TTAATCAGGC GCTGTATCGC
GACCGGCTGC GTGAGCTTAC TGCGGATGTT GCCAATGAAC AGGAGCGTGC TCAACTGGTT
GAAGAACTCC AGCACACGCT GTTGCAGGAT ATTCCCGGCG GCGCGAAGGC ACAGCAGCGT
CCGCTAAACC GCTGGGTTTT GTTGCCGGGC GTATTACTGC TGGTTATCGT CAGCCTCGGC
GTGTTTTGGA AGACGTCTGC GGTTAATCGG GTGCAGGAGT TACAGCAGGT CGTTGCGTTA
ACGCCGGACC TGATGAAGCG GGCATTGGAT CCCGACGCTG AACCACTGAC TATTGAAGAG
GTCGCGCGTC TCGGTCTGGG GCTGCGTAGC CAACTGGAAG CCCAGCCAGA TAATCCCCAA
GACTGGTGGA TGCTGGGGCG CATTGCGGGA TTGCTGAACA ACTACGACAT GTCCGTGCAG
GCGTTTGCCA GGGCGTTCCA TCTCGATCCG AAAAATACGG ATCTGGCACT GGATTATGCC
GATCTGCTGT CGCGCTCCAC CGACCCGCGT GATAGCCAGC GTGGTGGAGA CATGCTGCGT
GAACTGATGC ATTCCGGCTC GACCAATGTG CGCGTGCTGA GCCTGCTGGC TTTCAATGCC
TATGAAGCCC AGCGCTATCA GGACGCGATT GATGCCTGGC AAACGATGCT GACGCTGCTC
CCGCAAAACG ACACACGTCG TGCGGTCATC GAGCGCAGCG TCGCGCAGGC GAAAGCGTCA
CTGTCGGTGC AGGCGGTCAC TGGGAAGTAA
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| Protein sequence | MMLLTATIVL SLIALSALLL APWSSRGECD RDAINQALYR DRLRELTADV ANEQERAQLV
EELQHTLLQD IPGGAKAQQR PLNRWVLLPG VLLLVIVSLG VFWKTSAVNR VQELQQVVAL
TPDLMKRALD PDAEPLTIEE VARLGLGLRS QLEAQPDNPQ DWWMLGRIAG LLNNYDMSVQ
AFARAFHLDP KNTDLALDYA DLLSRSTDPR DSQRGGDMLR ELMHSGSTNV RVLSLLAFNA
YEAQRYQDAI DAWQTMLTLL PQNDTRRAVI ERSVAQAKAS LSVQAVTGK
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