| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2369 |
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| Symbol | |
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| ID | 8133313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2725639 |
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| End bp | 2725884 |
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| Gene Length | 246 bp |
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| Protein Length | 81 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644865649 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_003017936 |
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| Protein GI | 253688746 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00820439 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAAGC AGGACGAACA GCGATTATTG GTCAAGATCG CTACGCTCTA TTATAGCGAA
GGGATGAAAC AAGCAGAAAT TGCCACCTCA CTCCATTTGT CACAGTCTTT TGTATCCCGC
GCCATCACGC GCTGTGTTAA AGAACGTGTG GTCAAAATCA GCGTAATTCA ACCCCCGAAC
ATGTTCATGG GGCTGGAAGC AGCAATTCGG GCACGGCAAT CTGCCATTAA TTTTATGTTT
TATTAA
|
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| Protein sequence | MSKQDEQRLL VKIATLYYSE GMKQAEIATS LHLSQSFVSR AITRCVKERV VKISVIQPPN
MFMGLEAAIR ARQSAINFMF Y
|
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| |