| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2343 |
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| Symbol | |
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| ID | 8133287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2694079 |
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| End bp | 2695044 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865624 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003017911 |
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| Protein GI | 253688721 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4168] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATTATTT TTACCTTACG ACGTCTGGTG TTACTGATAG TGACGCTGTC ACTCCTGACG
CTGGTTGGCT TTAGCCTCAG CTACTACACG CCCAATGCCC CGCTCAACGG CGCAGCGCTA
TTTGATGCCT ATCACTTTTA TCTCACCAGT CTGCTTCAGG GAGATTTTGG CCGATCCAGC
ATTAACGGGC AGGCCATCAG CGAGCTGCTG AAAGAAGTGT TCCCGGCCAC GATCGAGCTT
TGTCTGCTGG CGTTTGCGCT CTCGCTGCTG GTCGGCATTC CGCTGGGCAT TACCGCCGGT
GTGATGCAGA ACCGCGGCGC GGACATTGTG ATCAGCACGC TGGCGCTTAT CGGCTTTTCC
CTTCCGGTAT TCTGGCTGGC GCTGCTGTTA ACGCTCTTTT TCTCGCTGCA CCTCGGCTGG
CTGCCGGTTT CAGGCCGCTT TGACCTGCTC TATCAGGTGA AAACCGTCAC CGGGTTTGCC
CTGATTGACG CCTGGCTGTC AGATTCGCCA CACCGTGGCG AAATGATCGT CAGCGCTATC
CGCCACTTAA TTCTGCCGAT TACCGTGCTG GCCGTCGGGC CGACAACTGA AGTGATCCGC
CTGATGCGCG TCAGCACCAC GGAAATTATC AGCAAAAACT ATATTAAAGC AGCGGCCACT
CGCGGACTCT CGCGTTTTAC GGTCATTCGT CGCCACCTGA TTCACAATGC GCTACCGCCA
ATCATTCCCA AATTGGGATT GCAATTTTCC ACGATGCTGA CGCTGACGAT GATTACCGAA
GTGGTCTTTA ACTGGCCGGG CATCGGCCGC TGGCTGGTGA ACGCCATTCG CCAGCAGGAT
TATGCCGCGA TTTCTGCGGG CGTCATGGTG GTCGGCGCGA TGGTCATCAC GGTCAACATC
CTGTCCGATA TTTGGGGTGC TATGGCAAAT CCGTTGAAAC ACAAGGAATG GTATGCCCTT
CGATAA
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| Protein sequence | MIIFTLRRLV LLIVTLSLLT LVGFSLSYYT PNAPLNGAAL FDAYHFYLTS LLQGDFGRSS
INGQAISELL KEVFPATIEL CLLAFALSLL VGIPLGITAG VMQNRGADIV ISTLALIGFS
LPVFWLALLL TLFFSLHLGW LPVSGRFDLL YQVKTVTGFA LIDAWLSDSP HRGEMIVSAI
RHLILPITVL AVGPTTEVIR LMRVSTTEII SKNYIKAAAT RGLSRFTVIR RHLIHNALPP
IIPKLGLQFS TMLTLTMITE VVFNWPGIGR WLVNAIRQQD YAAISAGVMV VGAMVITVNI
LSDIWGAMAN PLKHKEWYAL R
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