| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2333 |
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| Symbol | |
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| ID | 8133277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2683806 |
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| End bp | 2684171 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865614 |
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| Product | DNA-binding transcriptional activator PspC |
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| Protein accession | YP_003017901 |
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| Protein GI | 253688711 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | [TIGR02978] phage shock protein C |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.817852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATA CGTGGTCAGG TAAAACGTTA TACCGCATAC CGGAAGAAGG CATGCTGAAA
GGGGTTTGTG CTGGTTTAGC GCGTTATTTT GACGTGCCGG TGAAGCTCCT GCGGATAATC
GTGGTGCTGT CGATGTTTTT CGGCCTGTTC TTTTTCACTA TTGTGGCTTA CATCATTCTG
ACGTTTATGC TCGATCCGGC TCCGGCGGGA ATGGGATTTG AGGATGAAAA AACGGCCCGC
ACACCCAGCC AACTGCTGAA TGAGGCGGAT GCGACATTGC AGGCCAGCGA ACAGCGCCTG
CGCAGCATTG AGCGCTATGT CACCTCGGAT ACGTTTGGCG TTCAGAACCG CTTTCGTCAC
CTGTAA
|
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| Protein sequence | MKNTWSGKTL YRIPEEGMLK GVCAGLARYF DVPVKLLRII VVLSMFFGLF FFTIVAYIIL
TFMLDPAPAG MGFEDEKTAR TPSQLLNEAD ATLQASEQRL RSIERYVTSD TFGVQNRFRH
L
|
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