Gene PC1_2323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2323 
Symbol 
ID8133267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2664045 
End bp2666159 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content39% 
IMG OID644865604 
ProductHemolysin-type calcium-binding region 
Protein accessionYP_003017891 
Protein GI253688701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATCA CATATGAATA CCATTACGGA AATGGTGGGT TCATTCTATC AAAATCACAA 
CAAGAAGAAC TTAGAATATT ACTTGACAAA CAAATAACTC AGTCTAACAC AGGAGCAAAA
TCGCTCGCTG TCCCGCTATA TGATAAAATC CTCAGTTATC TTCCTGTACC CAGCATAAAC
ATAGGTGAAT ACTTCAAGGT ATATACTTGG TTACAGGGCG CTCGTGAAGT CAATAACGAC
TCAAGCGTAT ATTCCGTTTT TATTAGGAAT TATACCAAGA TACAGTATGA ATTACGTTAT
GGAGAACTGA GCGACCTCGA ATTAAGTATA CTTAACAATA AAATCAATGA GGCCTCTAAC
AATATAGGAT TTGAGTTGGT TAGAAATATA CTTAACCACA ACGGCTTACT TCCCGGATTA
GAAGGGCTAG GTGTATTAGA CGGCGGTGAA GCGGCCAGAA AGGTATTTCA AGGTGACATT
TATCCAGAAG GTGACTTTAC AGGCTGGGCT GGTACAATGC TTTTCCCTTT CTTAGGCTAT
GATCGGTTTT ATGAAGAGTG GTTATTAACC ACAGAAGAAA TTAATGCAGA AATCCGTACA
GGGAGCGGTA TTGTAGACCG AATAATAAAA GAACATAGCG GAACTTATGA CTTGATTGCC
GCATTGCAGG CTAACCAGGA AACCATTGAT AGTTATAATT TGCTAGAGTC TATATACGCC
GTTATTCGCA GCTTTGAAAA TGTCGATAAA TCACAGCAAG AGATTATCGA GCAAACCAAT
AATTTTATTA GCACAACCTA CGCGCTGCCA GTTGACCATC CGTTTTTAGC CGGTAATAAA
TTACCTTATG ATAAGGTTTT ATTTCAAACT ACAAATTTAG GATTCTCATC AGGTAGTCAA
GGCGATGATG ATTATAAGGA CTTTTGGATA GGTGACAGAG CAAACTATCT TAATTATATC
GTGCATGCTG GTATAGGAAA TGACAACATC CTTGGCGTCC CTACGACTTA TTTAGGTCTA
ACTCCCGGCA GTGCGCTTAT TGATGGTGGG CCAGGTTACG ATACCTTATC CTATCACGCT
ACTCGGGATG GTGGCGATAA CGCAGTCCCT CTTAAACTCA GTATTAGTTT TGAAAAAATA
GATAGCCCTT TGCATAACTG GAGATTCTCT GTCGATAAGT CACCATCTGA AGGGTATAGT
ATTTATAAAG GACATGATTA TGCTTATAGC ATAGAAAAAC TCGAAGGGAC AAATAACTCT
GACACGATTA TCATAAAGGA ACTCCCTGTA TCTAATGAAC ACATCATTGT GGATCTATTA
GGTTCTAAGA CCGGATATGG CGACACGATT GACCTTTCCC ATATTAACCA TGGAGTAGAA
ATTTCGTTAA TCGGTAATGA AGTTGTATTT CCCTTTGAAG GTGACGGTTC CCTGACAATC
AGAAATATGG AGAACATCAT TGGCACATCA TTTAATGATG TATTATACGG AAATGGCAAC
AGTAATATTA TTGTTGGCGG AAGAGGCGAA AATATTATTT ACGGAAACGG AGGTGCAGAT
AAATTCGTTA TTACCCAGGG GGTGAATACT ATCAAAGATG CTGATAGCGA TGACAAACTT
TACATTAATC TTTCATCTAT AAACCAGTTA ACTAACCAAA AAGACCTTGG TTTAGAATTA
AAAGGGGGAT TTATTGTTCG CAGTAATTCG CCAAATCCCG GAGGCGAAGT GGCACTTCAA
GATGGTGATA CTGCTGTATT TTATCCTGCT ATCCCTAACC CTATGAATTT TTCGCCTGCA
CTTGGGGGAA GCAGGGATAT GATTGATGAA ACGCTGGGCG ATCAATTTAT TGTTCGTTAT
ACTTTGTCCG GCACAACACT GCTCGTATCG GCTTCTTTTG CTAATCTGGA TCCCGCAGAA
GCTATCATTG AAAACTATAA TGCTGGCGAT CTTGGATTAA AATTCAAATC TCTTGTTGTT
CCTAACTATT CCAATGCAGC TGCTTCACAT GCCAGTAATA TGGATCAGCT CGTTGACCAA
TATATTCAAT TACACTCAGA AATGATTACA GACCGCTTCA CGCTCCCTAC ATCTTCTGAT
TTATGGTATG CCTGA
 
Protein sequence
MAITYEYHYG NGGFILSKSQ QEELRILLDK QITQSNTGAK SLAVPLYDKI LSYLPVPSIN 
IGEYFKVYTW LQGAREVNND SSVYSVFIRN YTKIQYELRY GELSDLELSI LNNKINEASN
NIGFELVRNI LNHNGLLPGL EGLGVLDGGE AARKVFQGDI YPEGDFTGWA GTMLFPFLGY
DRFYEEWLLT TEEINAEIRT GSGIVDRIIK EHSGTYDLIA ALQANQETID SYNLLESIYA
VIRSFENVDK SQQEIIEQTN NFISTTYALP VDHPFLAGNK LPYDKVLFQT TNLGFSSGSQ
GDDDYKDFWI GDRANYLNYI VHAGIGNDNI LGVPTTYLGL TPGSALIDGG PGYDTLSYHA
TRDGGDNAVP LKLSISFEKI DSPLHNWRFS VDKSPSEGYS IYKGHDYAYS IEKLEGTNNS
DTIIIKELPV SNEHIIVDLL GSKTGYGDTI DLSHINHGVE ISLIGNEVVF PFEGDGSLTI
RNMENIIGTS FNDVLYGNGN SNIIVGGRGE NIIYGNGGAD KFVITQGVNT IKDADSDDKL
YINLSSINQL TNQKDLGLEL KGGFIVRSNS PNPGGEVALQ DGDTAVFYPA IPNPMNFSPA
LGGSRDMIDE TLGDQFIVRY TLSGTTLLVS ASFANLDPAE AIIENYNAGD LGLKFKSLVV
PNYSNAAASH ASNMDQLVDQ YIQLHSEMIT DRFTLPTSSD LWYA