| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2273 |
|---|
| Symbol | |
|---|
| ID | 8133217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 2613519 |
|---|
| End bp | 2614094 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644865560 |
|---|
| Product | YceI family protein |
|---|
| Protein accession | YP_003017847 |
|---|
| Protein GI | 253688657 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2353] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.322488 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCA TCCTTCCCGT ACTGGCCAGT GGGCTGCTCA TCAGCCCGCT GTTACATGCT
ATGCCGCTTA ACTACACCGT TGCTACTGAT AACACCGTCA TTGGGCTTTC GTGGCAAGCA
TTTGGGCACT CATCACAAGC CTCTCTCGAC GGCGTGACGG GCAACATTAC ACTGGATGCT
GAAAAGGAAA TGAATGACCG TATTGATGTG AAAATCCCCA TCACGACGCT ACAGGCTTCC
AACAGCCTGT TGACCTATCA GTTAAAAAGC AGCCTGTTTT TTGATGCTGA ACACTATCCC
GATATTACGT TCACCAGCAG TAGAGTTGTG GCGCTGGGGC AGGGGCACTT CCGGGTTTTT
GGTTCACTGT CGGTAAAAAA TGTCCAACGT CCGGTCATTC TGGAAGCCAC ACTTGAAGAA
CAGGGCGGAA CGTCATCGCA TGACGGTTCG CTGTCTCTTC ATGCTACCAC CGCGATTTCG
CGCTCCTCGT TTAACATGGA TCGGTTTACC GGGGTGGTGG ACGATCGCGT CGCGATTAAT
ATTGAAATCC GGGCGAAAGC CCGACACTCT GTCTAA
|
|---|
| Protein sequence | MTRILPVLAS GLLISPLLHA MPLNYTVATD NTVIGLSWQA FGHSSQASLD GVTGNITLDA
EKEMNDRIDV KIPITTLQAS NSLLTYQLKS SLFFDAEHYP DITFTSSRVV ALGQGHFRVF
GSLSVKNVQR PVILEATLEE QGGTSSHDGS LSLHATTAIS RSSFNMDRFT GVVDDRVAIN
IEIRAKARHS V
|
|---|
| |