| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2270 |
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| Symbol | |
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| ID | 8133214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2611364 |
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| End bp | 2612086 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865557 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003017844 |
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| Protein GI | 253688654 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACAACTT TTTCTTCTGC TCCCGTGTTA ATTACCGGCG GCGCGCGGCG TATTGGGCTG
GCACTGGCGC GTTCGTTTCT GGCGCAGTCG ATTCCGGTCA TCATCAGCTA TCGTACGCCT
TATCCCGAAC TGGAGGCGTT ACAGCAAGAC GGCGCGGTTT GTCTGGCCGC CGATTTTTCC
ACCACGGAAA ATATCTATGC GTTTGCGGAG CAAATCCAGT CGCTCACGCC GCGGCTGCGC
GCCATTATTC ACAATGCCAG CCGCTGGGAA CCAGAAAGTG CCACAATACC GCCAGAACAA
ACGCTGGCCG ATATGCTGCA AATTCATGTC TATACACCCT ACTTGCTCAA CCAGTTACTG
GAACCTTGCC TGCGCGGGCA AGGCACCGCG GGTGCAGATA TTATTCATCT GACGGATTAC
GTGGTAGAAA AAGGCAGCGA CAAACACATC GCCTATGCCG CCAGTAAAGC GGCGCTGGAT
AATATGACGC GTTCGTTTGC CCGCAAGCTG GCACCGGAGG TGAAAGTCAA CGCGATTGCC
CCCGGTTTAA TCCTGTTTAA TGAACAGGAT GATGAAGCCT ATCGTCAGCA GGCGCTGGAC
AAATCCTTGA TGAAAATCGC CCCCGGCGAA GAGGAGATCG TCCAATTGGT GGCCTACCTG
CTCAACAGCC GCTACGTTAC CGGGAAAACG CTGGGCGTTG ATGGTGGCCG GGCTTTGGGT
TAA
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| Protein sequence | MTTFSSAPVL ITGGARRIGL ALARSFLAQS IPVIISYRTP YPELEALQQD GAVCLAADFS
TTENIYAFAE QIQSLTPRLR AIIHNASRWE PESATIPPEQ TLADMLQIHV YTPYLLNQLL
EPCLRGQGTA GADIIHLTDY VVEKGSDKHI AYAASKAALD NMTRSFARKL APEVKVNAIA
PGLILFNEQD DEAYRQQALD KSLMKIAPGE EEIVQLVAYL LNSRYVTGKT LGVDGGRALG
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