Gene PC1_2262 details

Gene Information

• Locus tag: PC1_2262
• ID: 8133206
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 2601988
• End bp: 2602638
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644865549
• Product: transcriptional regulator NarL
• Protein accession: YP_003017836
• Protein GI: 253688646
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0331529
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAACG AAGATGCTGC CACCCTACTG CTGATTGATG ACCATCCCAT GTTGCGCAAT 
GGCGTGAAGC AACTCATCAG CATGGACCCG GAATTACAGG TAGCAGGTGA AGCCAGTCAC 
GGCGAACAGG GTGTTGAGCT CGCGGAGCAG TTGGATCCGG ATTTGATTTT GCTCGATTTG 
AACATGCCCG GCATGAATGG CCTGGAAACG CTGAATCGTC TGCGGGAAAA ATCGCTGTCT 
GGTCGTATTG TCGTCTTTAG CGTATCTAAC CATGAAGACG ATGTTGTCAA CGCCTTAAAA 
AATGGGGCCG ATGGTTACCT GCTGAAAGAT ATGGAGCCAG AAGATTTACT GGCTGCACTG 
CATCAGGCCG CTTCAGGAAA AATGGTGCTG AGTGAAACAC TGACGCCGAT TCTGGCCGCC 
AGCCTGCGTG AAAGCCGTCA CAGCAGCGAC CGGGATATTC AGCAGCTCAC GCCGCGCGAA 
CGCGATATTC TGAAACTGCT GGCTCAAGGA TTGTCCAATA AAGTCATTGC CCGCAAACTC 
ACGATTACCG AAAGCACCGT TAAGGTTCAC GTCAAACACC TGTTGAAGAA GATGAAGTTA 
AAATCACGGG TTGAAGCGGC CGTCTGGGTA TTACAAGAAA AAGTGATTTA A 

 

Protein sequence

MINEDAATLL LIDDHPMLRN GVKQLISMDP ELQVAGEASH GEQGVELAEQ LDPDLILLDL 
NMPGMNGLET LNRLREKSLS GRIVVFSVSN HEDDVVNALK NGADGYLLKD MEPEDLLAAL 
HQAASGKMVL SETLTPILAA SLRESRHSSD RDIQQLTPRE RDILKLLAQG LSNKVIARKL 
TITESTVKVH VKHLLKKMKL KSRVEAAVWV LQEKVI