| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2251 |
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| Symbol | |
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| ID | 8133195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2586770 |
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| End bp | 2587711 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644865538 |
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| Product | Ornithine cyclodeaminase |
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| Protein accession | YP_003017825 |
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| Protein GI | 253688635 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.217432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTTA TTTCTGAAGC AGAATCGGCA TCACTCATCA GCCATGAGCT GGCCTATGAT
GCTGTTCGCG AGGCGCTGCT CGCCGCCAGC GAACCGGAAG CTCGCAGTTT TCCAGTGGTA
CACGGCCAAG GCTCCGATCC AGGTAACACT TTCAGCATCA AAGCATCCGC CACAAGTGAA
CTTGCGGGGC TAAAAGTCGG TTCGTTCTGG CCGGGAAATC CTGCTAACGG GCTGCCCCGT
CATAATTCCC TGATTTTGCT GTTCGATCAA CAAATCGGGA AAATCGCTGT CGCGATTGAA
GCCGGAAAGG TAAACGCCTT TCGTACCGCC GCTGCCAATG CCGTTGCCGC CGATTTGCTG
GCAAGACCTG ATGCCTCGGT TTTGGCCGTG TTCGGCACCG GCAATCAGGC GCGCTATGAG
TGCGCCGCGC TGGCAAGAAT TCGCCCGATT CGTACCGTGC TGATTGTCGG GCGCGATAGC
CGCAAATCCG CAGAGATGGC ACAAGAACTC AAGGCCGCCG GGCTGGATGC GCAAATCAGC
GATGCGGAAA GCGCGTGCCG CGCAGCGGAT ATCATCGTGA CGGCAACGCC ATCCCGCGCG
CCGCTGTTTA ACGCAGACTG GGTTAAAGCC GGAACGCATG TCGTCAGTAT GGGATCGGAC
GCCGTCGGCA AGCAGGAACT GCCGCCAGAA CTGTTTACCG CTGGCCGCCT GTTTTGCGAT
CTGCCTTCCC AGTCCCGCAT GATAGGTGAC TTCCAACACG CGCCAGCCCA TGTGACGCTG
ACGGCCATCG GCGACGTGAT TAGCGCAGGT GCAGCGGGAC GACAAACACC GGACGACATT
ACCGTGTTTG ACAGTTCCGG CTTGTCCATT CAGGACTTAT ATATCGGCCA GCGCATTCTT
GCCGCCTGGC AGCAGGCTCA ACGAGATGAA GGTGCACAAT GA
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| Protein sequence | MIFISEAESA SLISHELAYD AVREALLAAS EPEARSFPVV HGQGSDPGNT FSIKASATSE
LAGLKVGSFW PGNPANGLPR HNSLILLFDQ QIGKIAVAIE AGKVNAFRTA AANAVAADLL
ARPDASVLAV FGTGNQARYE CAALARIRPI RTVLIVGRDS RKSAEMAQEL KAAGLDAQIS
DAESACRAAD IIVTATPSRA PLFNADWVKA GTHVVSMGSD AVGKQELPPE LFTAGRLFCD
LPSQSRMIGD FQHAPAHVTL TAIGDVISAG AAGRQTPDDI TVFDSSGLSI QDLYIGQRIL
AAWQQAQRDE GAQ
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