| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2241 |
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| Symbol | |
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| ID | 8133185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2577983 |
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| End bp | 2578762 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865528 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003017815 |
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| Protein GI | 253688625 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATACGC CGCACTTCTT TGCCCTGTCT GGAAAAACCG CGCTCATCAC CGGAGGATCG
CGTGGGTTAG GGTTGCAAAT TGCCGAAGCG CTCGGTGCAC AAGGCGCTCA TATTATCCTC
TCAGCGCGCC ACGCCGATGA ATTACAGACT GCGCAGTCAC ACCTCTCCTC GCTGGGTATT
CGTGCCGAAT GGATTGTCGC CGACAATACG CAAGACCGCG ATATTGAACG CCTCGCAGAG
GAAGCCATCG CTAACACAGG TCAGATAGAT ATTCTCGTCA ATAATGCCGG TACCGCATTC
GGTTCCCCGG CGGAAGACCA TGCGATTGCT GACTGGGATC GCGTCATGAA CCTGAATATC
CGCAGCCTGT TTTTATTAAC GCAGAAAATC GGTAAAGGCA GCATGATCCC CCGCCGCTAT
GGAAAAATTA TTAACGTGGC ATCGCTTGCC GGTTTACAGG GTAATCTGCC CGGCTGGCTG
GAAGGCATCG CCTACAGCAC CAGCAAAGGT GCCGTGGTGA ATTTTACCCG AGCATTAGCG
GGCGAATGGG GAGAATTTAA TATCACCGTC AATGCACTCG CGCCCGGTTT TTTCCCTTCA
ACGATGACGC AGAACCTGTT GAATCGGCTT GGCGTCGATG CGCTGGCGCA AAAGTCCCCA
CTGCGACGCA TTGGTGATGA TGAAGACTTA AAAGGTGCTG CGATCTTATT TGCTTCCGAC
GCCAGTAAAT ATATTACGGG CCAAATACTT TCTATTGACG GAGGTATGAG CGCCATATAA
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| Protein sequence | MDTPHFFALS GKTALITGGS RGLGLQIAEA LGAQGAHIIL SARHADELQT AQSHLSSLGI
RAEWIVADNT QDRDIERLAE EAIANTGQID ILVNNAGTAF GSPAEDHAIA DWDRVMNLNI
RSLFLLTQKI GKGSMIPRRY GKIINVASLA GLQGNLPGWL EGIAYSTSKG AVVNFTRALA
GEWGEFNITV NALAPGFFPS TMTQNLLNRL GVDALAQKSP LRRIGDDEDL KGAAILFASD
ASKYITGQIL SIDGGMSAI
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