| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2240 |
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| Symbol | |
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| ID | 8133184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2576603 |
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| End bp | 2577631 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644865527 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003017814 |
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| Protein GI | 253688624 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAACA CGATTCTGGT TGCTGGCGCA GGTGGCTACA TCGGCATACC ACTATGTCAT
TTATTAATTA ATCAGGGATA CCGCGTGGTG GCCTTCGATC GCTTTTACTT CGGCCAGCCC
GTATCAGAAA TGCCACAATC TCCAGAATTC CATACGCTAC GTGGCGATAT ACGCCACATC
ACCCCCGATA TATTGCACAA TGTTGAAGCC GTCATCGATC TCGCGGGATT AAGCAACGAT
CCTGCCGCAC AGATATCGTC CACACTCACC CATGCCATTA ATTACGACGG CGCTTGTCAT
CTCGCCAATA CGGCGAAAAA GGCGGGTGTT CAGCGCTATA TCTATATGAG TTCCGCCTCG
GTTTATGGGC GTTCCGGTGC AGAATCAGCA GATGAAGAAA TGGAGTGCAA ACCACAAAGT
CTTTACGCGG AGCTAAAACT GAATGTTGAA CGAGAACTTA TTCGGCTAAG CGATACCACC
TTTCAGCCAA TTATTCTGCG TAACGCCACA GTGTTCGGCC TGGCACCTCG TATGCGCTAT
GACCTCTCCG TCAATATCAT GACGCGTATG GCCGTGCGGG AGAAATTCAT TACCATTGAT
GGTGATGGCC TCCAGCACCG TCCGTTTATT CACGTTCAGG ATGTCGCCCG TGCCGTACTA
CTCGCCTTAC AGCTTGATCT CCCACTTTCA GTGCCCCCCG TTTTTAATAT TGGTGGTGAC
TCGTTAAATC ACACCATCAA CAGCATTGCT GCCATCATCA CCGAGGAAAT TCCCGAGGTG
AAAATCGTTC ATCACCCTCT ATCTCTGGAT ACCCGTGATT ATCAACTCTG TTTTTCCCAT
GCGAGAACTA CGTTAGGTTT TTTACCTACA CGCAGCATTC GTGATGGAGT AAGAGAAATT
GTTCATGTGC TAACTACCGA TCAGCTGGCG GGAACACAGC CGACCTGCTT TACCGCACAG
TGGTACACGG ATTTAATTGA GTGGGAGAAA CGCTTACAAC CTTTGCAGCT AGATGGGCAT
CTTTTTTAG
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| Protein sequence | MKNTILVAGA GGYIGIPLCH LLINQGYRVV AFDRFYFGQP VSEMPQSPEF HTLRGDIRHI
TPDILHNVEA VIDLAGLSND PAAQISSTLT HAINYDGACH LANTAKKAGV QRYIYMSSAS
VYGRSGAESA DEEMECKPQS LYAELKLNVE RELIRLSDTT FQPIILRNAT VFGLAPRMRY
DLSVNIMTRM AVREKFITID GDGLQHRPFI HVQDVARAVL LALQLDLPLS VPPVFNIGGD
SLNHTINSIA AIITEEIPEV KIVHHPLSLD TRDYQLCFSH ARTTLGFLPT RSIRDGVREI
VHVLTTDQLA GTQPTCFTAQ WYTDLIEWEK RLQPLQLDGH LF
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