| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2219 |
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| Symbol | |
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| ID | 8133163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2549495 |
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| End bp | 2550607 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644865507 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_003017794 |
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| Protein GI | 253688604 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR01928] o-succinylbenzoic acid (OSB) synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAG ACAAAATTGT ATTAAGAAAA ATGAAAATGG CGCTGAAAAC GCCATTTACT
ACCAGCTTTG CGACGCAGAC GGAGAAACAC TTCTCCATCG CGGAAGTTCA CGCGGGTGGA
CATATTGGTT ACGGCGATTG CTCGGCAATT TCTCTGCCGT TTTATAACGA AGAAACCAAC
GTCACCGCGT GGCATATTAT GCGTGACTTC CTGATCCCGA TGGTTAAGCA GGCCGGAGAT
ATTGAGCACC CATCACAGGT GCGCGATATT TTCGCGCCGG TAAAGCGTAA TAACTGCGCC
AAAGCGGCAA TCGAAGGCGG TATTTGGGAT GCTTACGCGA AAATAAAAGG CGTACCGCTA
CATCAACTGC TGGGTGGCGT ACGGGATAAA GTCGAAGCGG GTGTCAGCAT CGGTATTCAG
GAAACGCCGG ATAAATTAGT CAGCGTGGTC GATAATTTCC TGAAGGAAGG CTACAAGCGC
ATCAAAATAA AAATCAAGCC GGGAAAAGAC TACGACTATA TTGCGGCGCT GCGTCAGACG
TTTGGTGATA TTACGTTGAT GGTGGATGCC AATTCCGCCT ACACGCTGGA CGATATCGAT
TTCTTTAAGC GGATTGATAA ATTCAATCTG CTGATGATTG AGCAGCCGCT GGCGCACGAC
GATATTATCG ACCACCGTAA ACTTCAGGCC GCAGTGAATA CGCCTATCTG TCTGGATGAA
AGTATTGCCT CGGTAGAAGA CGCGCGTAAG GCAATAGAGC TGGGTAGCGC CAAGATTATC
AATATTAAAG TCGCTCGTGT CGGTGGCATT ACCGAAACCA AGCTGATTCA TGATTACTGT
CAGGCGCACA ATATTCCGGT GTGGTGCGGC GGCATGCTGG ATACGGCGGT TGGTAAAGCG
CACAACATTG CGGTATCAAC GCTGCCGAAC TTTATCTACG CGCACGATAT TCCACCGTCT
TCCCGCTACT GGCATGAAGA CTTCATGCTG CCATTTGTCG AATTAGACAA AGACAGCTGC
GTTGCGGTGC CAAATAAGCC GGGAATCGGC TTCGATATCA ACCCTGAACT GTATGACAAA
TATTGCTACG GGCAGGAAAC CTTTTTGTTT TAA
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| Protein sequence | MKIDKIVLRK MKMALKTPFT TSFATQTEKH FSIAEVHAGG HIGYGDCSAI SLPFYNEETN
VTAWHIMRDF LIPMVKQAGD IEHPSQVRDI FAPVKRNNCA KAAIEGGIWD AYAKIKGVPL
HQLLGGVRDK VEAGVSIGIQ ETPDKLVSVV DNFLKEGYKR IKIKIKPGKD YDYIAALRQT
FGDITLMVDA NSAYTLDDID FFKRIDKFNL LMIEQPLAHD DIIDHRKLQA AVNTPICLDE
SIASVEDARK AIELGSAKII NIKVARVGGI TETKLIHDYC QAHNIPVWCG GMLDTAVGKA
HNIAVSTLPN FIYAHDIPPS SRYWHEDFML PFVELDKDSC VAVPNKPGIG FDINPELYDK
YCYGQETFLF
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