| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2218 |
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| Symbol | |
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| ID | 8133162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2548380 |
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| End bp | 2549189 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644865506 |
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| Product | NLPA lipoprotein |
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| Protein accession | YP_003017793 |
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| Protein GI | 253688603 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGATTGA AAAAACTTAT TCCACTCATG CTGGCGTTGG GCATTTCTCA GGCTTACGCA
GCAGATTCAG GCAAAGAAAT CACCATCGGC GTATCGCCGG GGCCATACGG TGATATGGTC
ACGAAAGCGA TTAAACCGGA GATGGTGAAA AAAGGCTACG ACGTAAAAGT GCGCGAATTC
AGCGACTACA TCCAGCCGAA CCTGGCATTG TCGAACAAAA GTATCGACGC CAACCTGTTC
CAAAACCGCC GCTACCTTGA CCGCTTCAGC GCGGATAAAG GGTTGAAACT GGCGGAAGTG
ATCACCGTGC CGACGGCCAG CATGGGCTTT TACTCCAACA AAGTCCGTTC GCTGAATGAG
CTAAAAGCGG GTGATATCGT CACGCTGCCA AACGATCCGT CCAATCTGGC ACGTTCGCTG
GATTTCCTGC AAAAATACGG CCTGATCAAG ATCAATCCAG AAATTACACC GACCAAAGCC
TCGCTGCGTG ATATCACTGA AAACCCGAAA GGTCTGGTCT TTAAACCGCT GGAAGCCGCA
CAGCTGCCGC GCGCGCTGGG TGGCGTAACC GGTTCGCTGA TTAACGCCAA TTTCGCGATT
TCTGCTGGTC TGAATCTGTC TGACGCAATT CAGTTAGATG TGCTGCCGGA AGATCTGAAA
AACATGATTG TCGTGCGTGC AGAAGATGCC GACAAACCGT TTGCTCAGGA CCTGAAAGCT
GCCGTTCAAT CCCCGGAGTT CGCCGCGTTC TTTGAAGATA AAAACTCCAT GTTCCACGCC
TTCCAGAAAC CTGAGTGGAT GAAGAAGTAA
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| Protein sequence | MRLKKLIPLM LALGISQAYA ADSGKEITIG VSPGPYGDMV TKAIKPEMVK KGYDVKVREF
SDYIQPNLAL SNKSIDANLF QNRRYLDRFS ADKGLKLAEV ITVPTASMGF YSNKVRSLNE
LKAGDIVTLP NDPSNLARSL DFLQKYGLIK INPEITPTKA SLRDITENPK GLVFKPLEAA
QLPRALGGVT GSLINANFAI SAGLNLSDAI QLDVLPEDLK NMIVVRAEDA DKPFAQDLKA
AVQSPEFAAF FEDKNSMFHA FQKPEWMKK
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