| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2216 |
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| Symbol | |
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| ID | 8133160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2545738 |
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| End bp | 2546673 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644865504 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003017791 |
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| Protein GI | 253688601 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAGCA CCGAGATTCG TTATTTTCTG GTGGTTGCCA CCACCGGTTC GCTCAGCGCC
GCTAGTCAAC ACTTGTTTGT GGCCGTGTCT GCGATCAGCC GTCAAATCCA GCGGCTGGAA
GAACGCATTG GCGTGCCGTT GTTCGAGCGT CATGCGCGCG GCATGGTGTT AAATGATGCC
GGGCGCATTC TGGAAAATCA TGTGCGCAAG AGCATGATGG ACATGGATGC CGCTGTGGCG
GAAATTCAGG GGCTGAAAGC CAGCCGTCGA GCGCTGCTGC GCATCGGCTG TACGGAAGGG
ATGGCGTTTG ATCTGCTGCC GACGCTGTTT GCGCGTTTTC GTCAGCATGA CCCGGATACC
ACCTTTGCGC TGAAGGTGGA CTCGGCGATG CAGGTGTCGC AGATGATTCG CAATGGTGAA
GTGGATATCG CGCTCCAGTT TGCGCTGGCG CCCGAGCAGG GCGTGAATGT GGAACTGGCG
CTGCCTGCGC CGCTGATGCT GCTGATGTCC GACGATCACC CGCTGGCGCA GCAGTCTATT
CAACTGGCCG ATCTGCATCC TTTCCCGTTG GCGCTGCCGG AACCCTCGAC CACGCTACGC
CAACTGTTTG ACCTCTCATG CCGCATGAAC GGCACCTTTC TGGAACCGAC GCTGTGCTGC
AACAACTTCA CCACGCTTTA TTACTATGCG ATGAGCACGC CGGGTGCGGT TACCGCCTGT
AGTTTCTATT CCGTGATGTA CAAGTGCTTA CAGGAACCGA TGCGCCTGAA ACCGCTGAAT
ATCAGGCAGC TTGACCAGCG TTCACTTCAG ATCCAAACGC TGGCAGGGAA AGCCCATGCG
CCCCAGCAGC AGGCTTTCCT GGATTTCATG ATGGCGGAGC TGCGTCAGGG GGAAGCGCAC
TACCTGAGTC AGGTGGCGAC AGAGACGATT TATTGA
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| Protein sequence | MHSTEIRYFL VVATTGSLSA ASQHLFVAVS AISRQIQRLE ERIGVPLFER HARGMVLNDA
GRILENHVRK SMMDMDAAVA EIQGLKASRR ALLRIGCTEG MAFDLLPTLF ARFRQHDPDT
TFALKVDSAM QVSQMIRNGE VDIALQFALA PEQGVNVELA LPAPLMLLMS DDHPLAQQSI
QLADLHPFPL ALPEPSTTLR QLFDLSCRMN GTFLEPTLCC NNFTTLYYYA MSTPGAVTAC
SFYSVMYKCL QEPMRLKPLN IRQLDQRSLQ IQTLAGKAHA PQQQAFLDFM MAELRQGEAH
YLSQVATETI Y
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