| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2213 |
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| Symbol | |
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| ID | 8133157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2543231 |
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| End bp | 2543491 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644865501 |
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| Product | type III secretion protein, HrpO family |
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| Protein accession | YP_003017788 |
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| Protein GI | 253688598 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4794] Type III secretory pathway, component EscS |
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| TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAATAA TCACACTTTT CCGTCAGGCC ATGGTGATGG TCGTGCTGCT CTCGGCGCCG
CCGCTGCTGG TTGCGGTGAT CGTCGGCGTG CTGATCTCGC TGCTACAGGC GGTGATGCAG
TTACAGGATC AAACGCTGCC CTTCGCCGTC AAGCTGATTT CCGTCGGGTT GGCGTTGGCG
CTCTGCGGAC GCTGGATTGG CGTAGAGCTG ATGCAGTTGG CTATTACCGC GTTCAACATG
ATTGCGCAGA CCGGGGTATA A
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| Protein sequence | MEIITLFRQA MVMVVLLSAP PLLVAVIVGV LISLLQAVMQ LQDQTLPFAV KLISVGLALA
LCGRWIGVEL MQLAITAFNM IAQTGV
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