Gene PC1_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2187 
Symbol 
ID8133131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2517425 
End bp2518237 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content45% 
IMG OID644865475 
Producthypothetical protein 
Protein accessionYP_003017762 
Protein GI253688572 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.12101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGAGA TAACTCGTTG GGCAATAGTG GATGCAGCAG CAGAGCCTGA ATTATTTTCG 
ATGCTGGAAC AATTCGATCC CCCTCATGCC AGTTTATATG CGGAGCCAGT ACCGAAAGAT 
ATTGGGCAAT TGGCACCGTA CCTGGTGCGA GTTGACGACG CTGTTATTCA GTGGCTTGAA 
CAACGGGAAA CCCCTTGGGG AATACTGCTT GAAAGCAGGG CTGATATGAA AACTCTGCGT 
CAGCATTTAC GTAAATATCT GCATGTTCAG ATCCCCAATG AAGAAAAGCC GGTCTTCTTC 
CGTTTTTATG ACCCGCGCAA TATCTGGCCG TTGCTATCCG TACTTTCTGA CTGGGAAAAA 
CATACCTTTC TCGGCCCCAT TGAGGTAATA ACGACGAACT GGCAGGGAAT ATCGCAGTGT 
GAAAGCTTTG CTACTCTGCG CGCAATGTTT CATGCAGGAA GTGCTTCTCG GCGAAAAATA 
ATGCGGATCT CTCCAGATCA GATGGATGAA TTAACGCTAA TTTTTGAGCA ACGCTATATC 
GACGATCTGG TTAGAAAAAT TGAAAGTTGG GACGGAGAAA GCAGGTCGAT TGATTTACCA 
AAAATTGGTG AAATATTTCG TTGGTTGAGA CTACAGGGAA TAACCGATGA CAGGAGTATT 
CGCGGTTTAT TCTCGCTGTT TCATTCCCGC GATTATCTGA CACTGGAAGA CATTCCTGCT 
GATTTTAAAA ATGTCCTCTG TGTCGAAGGT AAAAAGGGTG TCTTTAAAGC AGAAGTGCTG 
TTACTCAGGG AATTGGGCTG CGTGCCCTTA TAA
 
Protein sequence
MSEITRWAIV DAAAEPELFS MLEQFDPPHA SLYAEPVPKD IGQLAPYLVR VDDAVIQWLE 
QRETPWGILL ESRADMKTLR QHLRKYLHVQ IPNEEKPVFF RFYDPRNIWP LLSVLSDWEK 
HTFLGPIEVI TTNWQGISQC ESFATLRAMF HAGSASRRKI MRISPDQMDE LTLIFEQRYI 
DDLVRKIESW DGESRSIDLP KIGEIFRWLR LQGITDDRSI RGLFSLFHSR DYLTLEDIPA 
DFKNVLCVEG KKGVFKAEVL LLRELGCVPL