| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2173 |
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| Symbol | |
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| ID | 8133117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2486574 |
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| End bp | 2487500 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644865461 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003017748 |
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| Protein GI | 253688558 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGTAAAA TCGATTATAG ATTAATCAAG CAATTGTATT TATTCCTTGC TGTTGCTGAA
GAAGAGCATT TTGGTCGGGC GGCAGCGCGA CTTGGGATGT CTCAGCCTCC GCTGACTGAA
CAGATAAAAA TACTCGAGCA ATCTTTGAAG TTAACATTAT TCGAACGTTC ACGGCGTGGG
ACGACCCTTA GCCCAGCCGG AAAAGCTATT TTGCCGCAGG TCAAAAGATT TGTTGACCAC
ATGGCGTCGT TAGAAAAAAT GGTTAAAGAA GTCGCTCAGG GAAAGGTCGG TGTGATCCAT
ATAGGTGCAA TTACATCGGC GATGTTTGAT GTTGTCCCTG AATTTCTAAA CTATTTTAAA
CATCACTATC CCGACGTGAC TGTTTTTGTT AATGAGATCG ACAGTGCTGA AGCTATTTCA
TCATTATTAT CTGGCAAATT GGATATGGCT TTTGTCAGGG TTGAGGGGGA TATTGGACAG
ACACTGAAAT CTATACCGCT GACAGAAGAT TTATTGGGAG TCGCATTGCC TGTAGAACAT
CCTATGTCTT GTAATAATGA AATTCGGCTT GGCGATCTGA AAGATGAAGC ATTCGTTATG
TCATCACGAC GTGTGAACCC GACATATTTT GATATATTGA CCTCGGCTTG CAGAGAAAAT
GGTTTTAATC CACGAATCCT GTATGAAGTT CGTTCAGTGA CGGCGCAAAT TGCTTATGTG
AGTTGCGGAC AGGGCGCTGC TCTTGTCCCT TTGAGCATGA GTCGCTTTAT TCCTGGTAAT
GTCCGTTTAA TTCCTCTCAA AGAATCAATA AAGATAGTAA CAGCTGCTTT AGTTTGGAAT
CCTGGTAACG GTCATCCTCT TGTTGAATAT GGGGTTAAGT GGCTAACGCA ATACGTGGCT
AATAAGAAAT CCGTATTAAC CTATTAG
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| Protein sequence | MSKIDYRLIK QLYLFLAVAE EEHFGRAAAR LGMSQPPLTE QIKILEQSLK LTLFERSRRG
TTLSPAGKAI LPQVKRFVDH MASLEKMVKE VAQGKVGVIH IGAITSAMFD VVPEFLNYFK
HHYPDVTVFV NEIDSAEAIS SLLSGKLDMA FVRVEGDIGQ TLKSIPLTED LLGVALPVEH
PMSCNNEIRL GDLKDEAFVM SSRRVNPTYF DILTSACREN GFNPRILYEV RSVTAQIAYV
SCGQGAALVP LSMSRFIPGN VRLIPLKESI KIVTAALVWN PGNGHPLVEY GVKWLTQYVA
NKKSVLTY
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