Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2145 |
Symbol | |
ID | 8133089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2452857 |
End bp | 2453381 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644865433 |
Product | hypothetical protein |
Protein accession | YP_003017720 |
Protein GI | 253688530 |
COG category | [S] Function unknown |
COG ID | [COG4283] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGTGC CGGAGAACAA GGATGCCTTG ATCAAGGCAA TCAATAGTCA GTTTGCGCTG TTAATGAAAC GCATCGAAGC CGTTCCCGCC GATCGTGCAT TCGTGCCGGA ACTGGCTGGG CATGCGCAGG GAACGCAGAT GAGCCCGGCA AATCTGGTGG CGTATTTGCT GGGCTGGGGC AATCTGGTGC TGAAATGGCA TAAAAATGAA GAGCAGGGCA AGCAGATTGA TTTCCCAGAG ACGGGTTACC AGTGGAATCA GCTCGGTTTG CTGGCGCAAA AATTCTATCA GGACTTCGCC CACATCACCG AATGGTCTGA TCTGGTCGCG CGGCTTGTCG CGAATAAACA GGAGATCATT GCGCTGGTTG AGCGTTATAC CGATGCACAG CTCTACGGTG AATGCTGGTA CGGTAAGTGG ACGCGGGGTC GGATGATTCA ATTCAACACC GCTTCGCCTT ATAAAAATGC GGCAGGACGC CTGCGTGCGT GGGAGAAAAA CAAGCAACAT CATGATAATA AATAG
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Protein sequence | MAVPENKDAL IKAINSQFAL LMKRIEAVPA DRAFVPELAG HAQGTQMSPA NLVAYLLGWG NLVLKWHKNE EQGKQIDFPE TGYQWNQLGL LAQKFYQDFA HITEWSDLVA RLVANKQEII ALVERYTDAQ LYGECWYGKW TRGRMIQFNT ASPYKNAAGR LRAWEKNKQH HDNK
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