| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2134 |
|---|
| Symbol | |
|---|
| ID | 8133078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 2439459 |
|---|
| End bp | 2440595 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644865422 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003017709 |
|---|
| Protein GI | 253688519 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4639] Predicted kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGA ATACCATCAG GGGATTGGTC CCCGCTTCTG GCGCACAGCC AGATTTTGCT
GATTGTCTGG ACGCGTTTCC GGTGCTTCAA CGCGCCAAAG AAACGCCGCA GGAGCCGCGC
TACCACGGTG AAGGCGATGT CTGGACGCAT ATTATGATGG TTGTCGAGTC GCTATTGCAG
CTTCCCGATT ACCAGACGGC CACTCGCGAG CAGCAGGAAA TCTTGTTTTT TGCCGCGTTG
CTGCATGACG TTGCGAAATA CCGAACGACA GTGATTGACC CAGTGACAGG GCAAATTGGT
CAACCGGGAC ATTCACGCAA AGGCGCCATC GATGCTCGGG TGCTGCTGTG GGATGCCGGC
GTTCCGTTTG CAATTCGGGA AGCGATTTGC CGATTAATTG CGGTGCATCA GGTACCGTTT
TACTGCCTTG AGGATGAACG CCGTCGGGTG TCCCCACTCT TCACGATTCG CGAACTGTCA
TGGCAGTTAA GCATTCCGTT GCTGGCAACG CTGGCGGAAG CGGACATGCG TGGGCGCATC
TGTCAGGATC AAGCGCGTGT GCTCGACAGT ATTGAGCTGT TCCGCGAGCT GGCGCGGGAA
GAAGGCTGTT ACGGCCAGCC GAGATCGTTT GTCGATGCCC ACACGCGCCT GAGCTATTTT
CGCGGTGCTG ATGTGCATCC AGACTATCCG TTGTTTCAGG AACCGGGGTC AAAAGTCACC
GTGATGTGCG GTTTACCCGC TGCGGGTAAA GACACCTGGG TGCGGACACA TCGGCGCGAT
TTACCTGTGG TTTCGTTCGA CGATGCGCGA ACAGAGCTGG GGTTGAAACA CGGCGAGAAT
GAAGGAAAAG CGGTGCACTG GGCAACCGAT AAAGCACGTT CACTGCTGCG AACGCATGAA
CCGTTCGTGT GGAATGCCAC GCATCTGAGC CAGCAAATGC GCACCCGCAC GTTGGATCTG
TGCTATGCCT ACGGCGCAGA AGTGGAGATC GTGTATCTGG AGCGCCTGCG TCAGGAATTA
CTGCGTCGCA ACGGTAAACG GGACACCTCG TTGAGCAATA AAACACTGCA AGGTATGCTG
ACCAAATGGG AGCTTCCTGC ACCGACAGAA GCGCATGTTG TTCGCTATGA ACCTTAA
|
|---|
| Protein sequence | MDWNTIRGLV PASGAQPDFA DCLDAFPVLQ RAKETPQEPR YHGEGDVWTH IMMVVESLLQ
LPDYQTATRE QQEILFFAAL LHDVAKYRTT VIDPVTGQIG QPGHSRKGAI DARVLLWDAG
VPFAIREAIC RLIAVHQVPF YCLEDERRRV SPLFTIRELS WQLSIPLLAT LAEADMRGRI
CQDQARVLDS IELFRELARE EGCYGQPRSF VDAHTRLSYF RGADVHPDYP LFQEPGSKVT
VMCGLPAAGK DTWVRTHRRD LPVVSFDDAR TELGLKHGEN EGKAVHWATD KARSLLRTHE
PFVWNATHLS QQMRTRTLDL CYAYGAEVEI VYLERLRQEL LRRNGKRDTS LSNKTLQGML
TKWELPAPTE AHVVRYEP
|
|---|
| |