| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2129 |
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| Symbol | |
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| ID | 8133073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2434032 |
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| End bp | 2434727 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865417 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003017704 |
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| Protein GI | 253688514 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACGCC TGCTCATCAT CGAAGACAAC CCGGAGTTGG TGGCCAACCT ATACGAATTT
TTCGAGCCTC TGGGCTATGT GCTGGATGAT GCACGCGATG GTGCCACTGG TCTGCGTATG
GCCACGCAAA ATGATTACGA CGCCATTTTG TTGGACCTGA TGCTACCGCG ACTGGACGGC
ATGACGCTGT GCCGAAAACT CCGCCAGGAA TTTCAAAACC CGGTACCGGT GTTGATGCTA
ACCGCTCGCG ATCCAATAGA TGACCGCGTG CAGGGCCTTG CCCTGGGCGC TGACGATTAT
CTGGTGAAAC CCTTTTCACT CAAGGAACTG GACGCGCGTA TCAAGGCACT GGTGCGCCGC
TCCCAAGGCC GACAGGTGCA AGGCACGCTA GTCTGGGAAG ATCTACAGGT GGACACCCGT
GCCCCACAGG CCCAGCGACA GGGCCAGACT ATCAACCTGA CCCCTACCAC GCATAAATTG
CTACTGTGCC TGATACGATC CGCACCTGAT GTCGTTAAAA AACAGGAGAT GGAGTACTTA
CTCTGGGGCG ACGAACCGCC TGACAGTGGC GCTTTGCGCA CACACATTCA TGACTTGCGT
CAGCGGATTG ACAAAAATTT CACATCTGCG CTGATAGAAA CGGTGCATGG CGTAGGTTTA
CGCCTGCATA AGCCTGAAAA GGCTGCACCG GAATAA
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| Protein sequence | MTRLLIIEDN PELVANLYEF FEPLGYVLDD ARDGATGLRM ATQNDYDAIL LDLMLPRLDG
MTLCRKLRQE FQNPVPVLML TARDPIDDRV QGLALGADDY LVKPFSLKEL DARIKALVRR
SQGRQVQGTL VWEDLQVDTR APQAQRQGQT INLTPTTHKL LLCLIRSAPD VVKKQEMEYL
LWGDEPPDSG ALRTHIHDLR QRIDKNFTSA LIETVHGVGL RLHKPEKAAP E
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