| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2088 |
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| Symbol | |
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| ID | 8133032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2388052 |
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| End bp | 2389248 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865377 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003017664 |
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| Protein GI | 253688474 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAA AACCTGCTAT CAATAAATTT GCCCTGTTTG GACTGATGTT CATCCCCGGT
TTTACGTGGG CAACCTGGGT AACCCGAACC CCTGTGATGC GCGACGTACT GAATGCCTCA
ACGGAAACGA TGGGCATGAT CCTGTTTGGC TTTTCATGTG GTTCTATGCT CGGCGTATTG
GGAGCAGGAA AGGTCATTAA TGTCCTCGGT ATTCGTAAAA CCATGGCCGG CGGGTTTCTG
CTGCTTCTGC TTGGGCTACT CGTACTTGCC GCTTCGCTGT CGATTCAGAG CACGCCCAGT
GCTTTTATGG GGCTGTTGAT TTTCGGTGCC GGAGTCGGCT TGGTTGATAT TGCCATCAAT
ATCGAAGGGG CGGCGTTTGA ACAGCACCTG AATAAAAGCC TGATGACAAC GCTGCACGGT
TTTTTCAGTC TGGGAACGCT GGTCGGTGCT CTGACAGGGA TGGCGATGAC GGCTTTCGGC
ATTAACACGA CGCTGCATTT TGTCGTCGTT GTGGCACTGT CGATACTCAC CGCGATCATG
CTGATGCGTC AGATGCCGTG GCTGAGCGAT CTGGCCAGCG CGGAGCAAGA AGAAAAGGGG
AATTACAAGA CTCAGGTCTT CAATGAACTT AAAGACAGCC GGCTGTTGAT TCTCGGTGTG
GTGATTCTTG CGATGGCGCT GGCAGAAGGG TCTGCCAACG ACTGGTTACC ATTATTGATG
ATCGATGGTC ACAACTTTGG CCACACGACG GGAACGCTGG TTTATGTCGG GTTCACTGCT
GGTATGACGC TGGGCCGCTT TGCCGGCGGG TATTTTGTCG ATCGCTTCGG CAAGGTCCAT
ATGCTCCGCT TCAGCGCCGC GTCTGCCGCA CTGGGGCTGA CGCTGGTCAT TTTCTCGGAT
GCGCCGATGC TGGCCGCGGC TGCGGTTATC TTCTGGGGTA TTGGCGCATC GCTGGGGTTC
CCACTCACCA TTTCCGCCGC AGGCAGCGGA GAGAACAGCG CCGTTCGCGT CACCATTGCC
GCAACGCTAG GTTACTTTGC TTTTCTCGTC GGCCCGCCTG CGCTGGGCTT TCTTGGCGAG
GTTGCAGGGC TACGCATCGC CATGCTGCCG GTTCTTTTTA TGGTGGTACT GGCCTTCGTC
TGTTCATCTT CTGCCCGTGA ACGTTCAATC AGAACCGCAT CGGAAACCCC ATCCTGA
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| Protein sequence | MTTKPAINKF ALFGLMFIPG FTWATWVTRT PVMRDVLNAS TETMGMILFG FSCGSMLGVL
GAGKVINVLG IRKTMAGGFL LLLLGLLVLA ASLSIQSTPS AFMGLLIFGA GVGLVDIAIN
IEGAAFEQHL NKSLMTTLHG FFSLGTLVGA LTGMAMTAFG INTTLHFVVV VALSILTAIM
LMRQMPWLSD LASAEQEEKG NYKTQVFNEL KDSRLLILGV VILAMALAEG SANDWLPLLM
IDGHNFGHTT GTLVYVGFTA GMTLGRFAGG YFVDRFGKVH MLRFSAASAA LGLTLVIFSD
APMLAAAAVI FWGIGASLGF PLTISAAGSG ENSAVRVTIA ATLGYFAFLV GPPALGFLGE
VAGLRIAMLP VLFMVVLAFV CSSSARERSI RTASETPS
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