Gene PC1_2069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2069 
Symbol 
ID8133013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2374764 
End bp2375087 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content50% 
IMG OID644865358 
Producthypothetical protein 
Protein accessionYP_003017645 
Protein GI253688455 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.473334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCTT CAGGACAAAA TTCCGCAACA CACGATATTG CCAGCCTGAA ACAGATGGGG 
TCGCTGGAGC GAAAAACCTG CGAGATGGCA CAGCTAAAAA ACTCATTCGA TGCTGCTGTT
GAGGATGGTT CGCTGCGAGT TCAGGTTGTA TCAGAGCGAG CCGTGGAATT ATTCGAGGGC
GATGCTGGTC TGGCTGAGCG CTGGCTATCA GAGCCAAATC GCGCACTGGA ATGGAAAACA
CCAAATGAAA TGCTGTCGAA TCCATCAGGG ATAGACGCCG TTCTCAAATT GATGGCTCAG
TTGCAGCACG GTGTTTATCC ATAA
 
Protein sequence
MKPSGQNSAT HDIASLKQMG SLERKTCEMA QLKNSFDAAV EDGSLRVQVV SERAVELFEG 
DAGLAERWLS EPNRALEWKT PNEMLSNPSG IDAVLKLMAQ LQHGVYP