Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2069 |
Symbol | |
ID | 8133013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2374764 |
End bp | 2375087 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644865358 |
Product | hypothetical protein |
Protein accession | YP_003017645 |
Protein GI | 253688455 |
COG category | [S] Function unknown |
COG ID | [COG5642] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.473334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCTT CAGGACAAAA TTCCGCAACA CACGATATTG CCAGCCTGAA ACAGATGGGG TCGCTGGAGC GAAAAACCTG CGAGATGGCA CAGCTAAAAA ACTCATTCGA TGCTGCTGTT GAGGATGGTT CGCTGCGAGT TCAGGTTGTA TCAGAGCGAG CCGTGGAATT ATTCGAGGGC GATGCTGGTC TGGCTGAGCG CTGGCTATCA GAGCCAAATC GCGCACTGGA ATGGAAAACA CCAAATGAAA TGCTGTCGAA TCCATCAGGG ATAGACGCCG TTCTCAAATT GATGGCTCAG TTGCAGCACG GTGTTTATCC ATAA
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Protein sequence | MKPSGQNSAT HDIASLKQMG SLERKTCEMA QLKNSFDAAV EDGSLRVQVV SERAVELFEG DAGLAERWLS EPNRALEWKT PNEMLSNPSG IDAVLKLMAQ LQHGVYP
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