Gene PC1_2065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2065 
Symbol 
ID8133009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2370622 
End bp2371380 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content48% 
IMG OID644865354 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003017641 
Protein GI253688451 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0179548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAGTT TGTTTTCGTT AACCGCAAGA GCCAGCGTGC GTTGGCATGA TTTACCAGGG 
CAGGGTATTC CTGTTGTATT TATTCACGGA CTTGGGTGCG CTTCTTCTTA TGAGTATCCC
CGAATTGTTG CAGACCCAGC ATTCGGCGGA CGACGAGCCA TACTGATAGA CCTTCCCGGA
TATGGTTTCA GTGATAAACC TCGTGATTAT GATTACAGCA TTGCTCACCA GGCAGACGTT
GTCATCGAAG TAGTGAATGC ACTGGAACTT GGACAGTGCC ATATCTATGG CCACAGCATG
GGGGGAAGTA TTGCTATTGA AGTGGCCGAA CAATTACGTG AACGGGTGCG TAAACTGGTG
GTTTCAGAAC CTAATTTTCA TGCAGGAGGA GGCGTATACA GCCGCCTCCT AGTGGAGAAA
CCAGAAGCTG AATTTATATC GCAAGTGTAC GACAAGATAC TGACAAACCA CACATCGCCT
TGGAAAGGTT CGGCTCAAAA CGCGGCCCCC TGGGCAATGT GGCGGGGAGC TAAAAGTCTG
ATTGATGGAG CATCTCCCTC ATGGATGGAT ATCTTCCTCA ACCTGTCCTG TTCACGCACA
CTGATTTTTG GCGAACAATC ATTACCGGAC AGTGATTTCC AGTGTATCAA CCATAAGGGC
ATATCCGTAG CAATCGTACC AGAAGCAGGA CACTCGATGT CCTGGGAAAA TCCATCAGCA
CTGGCCGTAG TGTTACATAA GGAATTTAGT GAGGGATAA
 
Protein sequence
MQSLFSLTAR ASVRWHDLPG QGIPVVFIHG LGCASSYEYP RIVADPAFGG RRAILIDLPG 
YGFSDKPRDY DYSIAHQADV VIEVVNALEL GQCHIYGHSM GGSIAIEVAE QLRERVRKLV
VSEPNFHAGG GVYSRLLVEK PEAEFISQVY DKILTNHTSP WKGSAQNAAP WAMWRGAKSL
IDGASPSWMD IFLNLSCSRT LIFGEQSLPD SDFQCINHKG ISVAIVPEAG HSMSWENPSA
LAVVLHKEFS EG