Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2065 |
Symbol | |
ID | 8133009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2370622 |
End bp | 2371380 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644865354 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003017641 |
Protein GI | 253688451 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0179548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAGTT TGTTTTCGTT AACCGCAAGA GCCAGCGTGC GTTGGCATGA TTTACCAGGG CAGGGTATTC CTGTTGTATT TATTCACGGA CTTGGGTGCG CTTCTTCTTA TGAGTATCCC CGAATTGTTG CAGACCCAGC ATTCGGCGGA CGACGAGCCA TACTGATAGA CCTTCCCGGA TATGGTTTCA GTGATAAACC TCGTGATTAT GATTACAGCA TTGCTCACCA GGCAGACGTT GTCATCGAAG TAGTGAATGC ACTGGAACTT GGACAGTGCC ATATCTATGG CCACAGCATG GGGGGAAGTA TTGCTATTGA AGTGGCCGAA CAATTACGTG AACGGGTGCG TAAACTGGTG GTTTCAGAAC CTAATTTTCA TGCAGGAGGA GGCGTATACA GCCGCCTCCT AGTGGAGAAA CCAGAAGCTG AATTTATATC GCAAGTGTAC GACAAGATAC TGACAAACCA CACATCGCCT TGGAAAGGTT CGGCTCAAAA CGCGGCCCCC TGGGCAATGT GGCGGGGAGC TAAAAGTCTG ATTGATGGAG CATCTCCCTC ATGGATGGAT ATCTTCCTCA ACCTGTCCTG TTCACGCACA CTGATTTTTG GCGAACAATC ATTACCGGAC AGTGATTTCC AGTGTATCAA CCATAAGGGC ATATCCGTAG CAATCGTACC AGAAGCAGGA CACTCGATGT CCTGGGAAAA TCCATCAGCA CTGGCCGTAG TGTTACATAA GGAATTTAGT GAGGGATAA
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Protein sequence | MQSLFSLTAR ASVRWHDLPG QGIPVVFIHG LGCASSYEYP RIVADPAFGG RRAILIDLPG YGFSDKPRDY DYSIAHQADV VIEVVNALEL GQCHIYGHSM GGSIAIEVAE QLRERVRKLV VSEPNFHAGG GVYSRLLVEK PEAEFISQVY DKILTNHTSP WKGSAQNAAP WAMWRGAKSL IDGASPSWMD IFLNLSCSRT LIFGEQSLPD SDFQCINHKG ISVAIVPEAG HSMSWENPSA LAVVLHKEFS EG
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