Gene PC1_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1998 
Symbol 
ID8132942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2294444 
End bp2295196 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content52% 
IMG OID644865288 
Producthypothetical protein 
Protein accessionYP_003017575 
Protein GI253688385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTATCA CGGCTAACAC GTTGTACCGT GACACAATGA ACTTTACCCG CAACCAGTTC 
ATCAGCATCT TAATGATGTC ACTGTTGACG GCCTTCATTA CTGTCATACT GAATCATGCG 
CTATCGCCTT CTGTAGACGA GTTACGGATT CTGAGCAGTT CCGGCAGCGA TCTGTCATCT 
TCTGTCGAAT CCGGCCTGAT GGACTTGATT CAGCAGATGA CGCCGGAACA ACAAACCGTG 
TTGCTAAAAA TGTCGGCGGC GGGCACCTTT GCTGCGTTAG TGGGCAACGT GCTGCTGACG 
GGCGGCGTTC TGATGCTGAT CCAACTGGTC TCTGACGGGC ACCGCACCAG CGCACTGCGT 
GCGATTGGCG CTTCCACGCC TTTTTTACTG CGCTTACTTT TCCTGATTCT GCTATGCACG 
CTGCTCATCC AGCTTGGCAT GATGCTTCTG GTCATTCCTG GCGTGCTGCT GGCCATCGCA 
CTGAGTTTGT CGCCCGTGAT TGTCGTCACT GAAAAAAGCG GGATTTTCAG CGCGATTAAA 
GCAAGCACCA AATTGGCCTA TGGCAACTTA CGCGCAACCG CGCCAGCCAT CGTGATGTGG 
TTGTTGGCTA AAATCGCTAT TTTGCTGGTC GTGTCGAAGT TACCGATTTC CTCACCTACC 
GTGCTCGGCG TGGTTCTGAA CGGATTAAGC AACCTGATCT CCGCTATCCT GCTGATTTAT 
CTCTTCCGCC TTTATATGCT GCTGCGCGCA TAA
 
Protein sequence
MPITANTLYR DTMNFTRNQF ISILMMSLLT AFITVILNHA LSPSVDELRI LSSSGSDLSS 
SVESGLMDLI QQMTPEQQTV LLKMSAAGTF AALVGNVLLT GGVLMLIQLV SDGHRTSALR 
AIGASTPFLL RLLFLILLCT LLIQLGMMLL VIPGVLLAIA LSLSPVIVVT EKSGIFSAIK 
ASTKLAYGNL RATAPAIVMW LLAKIAILLV VSKLPISSPT VLGVVLNGLS NLISAILLIY 
LFRLYMLLRA