| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1954 |
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| Symbol | |
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| ID | 8132897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2245296 |
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| End bp | 2246633 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644865243 |
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| Product | PTS system ascorbate-specific transporter subunit IIC |
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| Protein accession | YP_003017531 |
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| Protein GI | 253688341 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3037] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCG TTATCAATTT CATTGTGAAA GATTTATTAG GCCAGGCATC CATATTAATC
GCACTGATCG CCATGATTGG TTTGATTCTA CAGAAAAAAT CAGTCGGAAA AGTTGCGGAA
GGAACGTTCA AGACCCTGCT GGGTTTCCTC ATCATGATGG CGGGGATTAA CATCATCGTC
GATACCCTGA CGTATTTGAA TAGCATCTTT ACTCAGGGTT TTGGCATGAC AGGCTACATC
ACCGATGTTG CCGCTATCGC CGGGCTGGCC AACCGCGAAC TCGGGTCAGA AGTGGCATTG
ACGCTTATGG TGATCTTTGC GGTCAACATC CTTATTGCAC GCATTACTCC CTTTAAATAT
ATCTTCCTGA CTGGGCAAGC CCTGCTGTGG ATGGCAACAA TCGGTACCGT GATCGGCTAT
AAATCGGGTT TAACCGGCGC AACACTGATC CTCACCGGAG GCATATTTGG CGGCATTATG
GCCGTGCTGA TGCCCGCGCT AGCGCAGCCG ATTGTACGTA AAATCACGAA TTCTGATGAT
GTGGCACTCG GGCATTTTTG TACCATCGGG TATCTGGTAC AGGCTGCCGT CGCCCGCGTA
GTCGGTAAAA ACTCCAAATC TACCGAGGAC TTAACGCTAC CCGATAACTT CAAGTTCTTG
CAGGATACCT ACCTGTCAAT GGCCGTGGTT ATGGTACCGA TGTACCTCAT CCCGGCCGTG
GCGGCTGGGC CGGCATATAT CGCGCAATAC GCCAACGGCG TTAACTATCT GATGTATTCC
TTCATGCAGT CCATGCAGTT TGTCGCAGGG GTGTTTGTTC TCTACAGCGG TGTACGTCTG
CTGCTTAATG AATTAGTTCC CGCATTCCGC GGTATCGCGA TGCGTCTGGT ACCCAACGCC
AAGCCCGCGC TGGATTGCCC GGTGCTCTTC CCTTATGCGC CCAACGCCGT CATTGTCGGC
TTTCTTGCTA CCACCGTCGG TTCTGTTCTG GGGATGCTGA TCTTCCCAAT GTTTGGGCTG
GCGATGATTC TGCCGGGGTT ATTGACCAAC TTCTTTGCTG GCGGGACAGC GGGTATTTTC
GGCAACGCAC TGGGAGGGCG TCGTGGCGCC GTCATCGGAG GCGTCGTTCA TGGTCTTTTC
ATTACCCTAT TGCCCGCCAT TCTGGTGCCA TTACTGGAAG TCTTCGGGTT TACCGGCGTG
ACCTTTAGTG ATTCTGATGT CATCAGTACA GGTCTGATAT TAGGGCACGC ATTCCAACAA
GATTGGTTAT TTGTCGCTGC ATTTGTCGCA TTCGTTGCAT TCATTGCCTT TATTGCGAAT
CGTAAATTAT CGCAATAG
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| Protein sequence | MNTVINFIVK DLLGQASILI ALIAMIGLIL QKKSVGKVAE GTFKTLLGFL IMMAGINIIV
DTLTYLNSIF TQGFGMTGYI TDVAAIAGLA NRELGSEVAL TLMVIFAVNI LIARITPFKY
IFLTGQALLW MATIGTVIGY KSGLTGATLI LTGGIFGGIM AVLMPALAQP IVRKITNSDD
VALGHFCTIG YLVQAAVARV VGKNSKSTED LTLPDNFKFL QDTYLSMAVV MVPMYLIPAV
AAGPAYIAQY ANGVNYLMYS FMQSMQFVAG VFVLYSGVRL LLNELVPAFR GIAMRLVPNA
KPALDCPVLF PYAPNAVIVG FLATTVGSVL GMLIFPMFGL AMILPGLLTN FFAGGTAGIF
GNALGGRRGA VIGGVVHGLF ITLLPAILVP LLEVFGFTGV TFSDSDVIST GLILGHAFQQ
DWLFVAAFVA FVAFIAFIAN RKLSQ
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