| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1903 |
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| Symbol | |
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| ID | 8132846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2196363 |
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| End bp | 2197091 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644865192 |
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| Product | Oligogalacturonate-specific porin |
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| Protein accession | YP_003017480 |
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| Protein GI | 253688290 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.67559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTA AATTACTAGC TCTGGCTGTT ACGTCATTAA TTAGTGTGAA TGCAATGGCT
GTGACAATTG ATTACCGTCA TGAAATGCAA GACACTGTCA AAAACGACCA TAAAGATCGT
CTTTCAATGT CTCACCGTTT TGCTAATGGT TTTGGTTTAT CTGCTGAAGC GAAATGGAAA
CAATCTGGTT CAGACAACAC TCCGAATAAA CCATTTAATG AACCTGTCAG CAACGGTACT
GAAGTCGTTG CCAGCTATGT GTACAACTTC AATAAAACTT TCTCTCTGGA ACCAGGTTTC
TCTTTAGATT CAAGCTCTGA CTCTAACAAC TATCGCCCTT ATCTGCGCGG TAAAATTAAC
ATCACAGACG ATCTTTCAAC TTCTCTCCGT TATCGTCCTT ACTACTTAAG AAAAAATGCA
AATACAACTA AAACAGGACC AGCCAATTAT ACCAAAGAAA CTGGTTACAA CCTGACCGCA
GTTGTTAGCT ATAAATTCCT GAAAGATTAC CAGATTGATT ATGAATTAGA TTACAAAAAA
GCCAACAAAG CAGGGCCGAG TGGTTTTCAA GCAGACAAAG AAAACTGGAA GATCGAGCAC
GATGTTAAAT TGGCTTATAA GTTAGACAAA AACTGGAAAC CTTATATGGC CATCGGTAAC
GTTGTCGGTG ATAAAAACAC TGACGAGCGT CAAACTCGTT ACCGTGTTGG TGTGCAATAC
AGCTTCTAA
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| Protein sequence | MKFKLLALAV TSLISVNAMA VTIDYRHEMQ DTVKNDHKDR LSMSHRFANG FGLSAEAKWK
QSGSDNTPNK PFNEPVSNGT EVVASYVYNF NKTFSLEPGF SLDSSSDSNN YRPYLRGKIN
ITDDLSTSLR YRPYYLRKNA NTTKTGPANY TKETGYNLTA VVSYKFLKDY QIDYELDYKK
ANKAGPSGFQ ADKENWKIEH DVKLAYKLDK NWKPYMAIGN VVGDKNTDER QTRYRVGVQY
SF
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