| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1850 |
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| Symbol | |
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| ID | 8132793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2136484 |
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| End bp | 2137764 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865139 |
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| Product | integral membrane protein, PqiA family |
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| Protein accession | YP_003017427 |
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| Protein GI | 253688237 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
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| TIGRFAM ID | [TIGR00155] integral membrane protein, PqiA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.20863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAC ATACTATCGC CAGTCCTGCG CCGTACTCCT CTCCCCGACC ACCGTTAACC
GATGGGGCGA AAAGTGCCGT ACCCGCAATC GATCGTTATC ATCGTTGCCC AGAATGTGAT
GCTTTTTTTG CGCTGCCGCC GTTGAAGCGT AACCAGACAG CGAACTGTCC ACGCTGTGAT
GCCAAAGTCA GCTCAGGCAG AGACTGGCCG ATTTCCCGAC TGGCTGCAAT GGCCGTTGCC
ATGCTGGTAT TGATGCCGTT TGCCTTCACT GAACCGTTAA TCAGCATTCG TCTTCTGGGC
GTCACCATCA ATGCCAGCCT GTTTGAAGGT ATTTGGCAAA TTACCCGTCA GGGGCATCCG
CTCACGGCAA GCATGGTTGC CTTCTGTACC GTTGGTGCGC CGCTCACGCT GGTCTTTTCG
CTGTTATACC TATTCTTTGC TCCCCGAATC GGCATGAATC TGCGGCCCAT CCTGCTCATG
TTGCAACGGC TAAAAGAGTG GATGATGCTG GATATCTATC TGGTTGGCAT GGCCGTCGCG
GCGATCAAGG TCCGAGAATT CGCGGATGTT CAGGCTGGCA TCGGGCTGGT CGCCTTTCTG
GCGCTGATGA TCTTAAGTCT GTTGACGCTG ATTCACTTAA ATACCGACCA GCTTTGGCAG
CGTTTTTATC CACGCATGAG GCCATTGATT GCGCCGGATC GCTATCGAAT CTGCCTTTCC
TGCCATTTCA CCAGTTCACC GGACAACCGG GGGCGCTGCC CTCGATGCCA TATTCCGCTT
CGCTTACGCC AGCGGCAAAG TCTGCAAAAA TCCTGGGCAG CACTGATTGC TTCCATCATT
TTACTGTTCC CCGCTAACCT GCTACCCATA TCGATTATTT ATGTCAACGG TGCCCGCACG
GAAGACACGA TCTTCTCCGG CATTCTGTCA CTCGCATCAG GCAATGTTCC TGTCGCGCTG
GTGGTGTTTA TCGCCAGTAT TCTGGTGCCG TTTACGAAAG TGATGGTGTT GTTCGGGCTG
CTGGTGAGCA TCCATCTCCG GTCAGAAGCC AATATCATGA TGCGCATGAA GATGCTGCGC
GTGATTCGCT GGATCGGCCG ATGGTCTATG CTCGATTTAT TTGTGATTGC CCTGACGATG
TCACTCGTCA ACCGCGATCA ACTACTCGCT TTCACCATGG GGCCTGCTGC TTTTTACTTT
GGCGCAGCGG TGATTCTCAC TATCCTTGCC GTTGAATGGC TGGATAGCCG ACTGATGTGG
GATAACACTG ATGTGGAATA A
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| Protein sequence | MKIHTIASPA PYSSPRPPLT DGAKSAVPAI DRYHRCPECD AFFALPPLKR NQTANCPRCD
AKVSSGRDWP ISRLAAMAVA MLVLMPFAFT EPLISIRLLG VTINASLFEG IWQITRQGHP
LTASMVAFCT VGAPLTLVFS LLYLFFAPRI GMNLRPILLM LQRLKEWMML DIYLVGMAVA
AIKVREFADV QAGIGLVAFL ALMILSLLTL IHLNTDQLWQ RFYPRMRPLI APDRYRICLS
CHFTSSPDNR GRCPRCHIPL RLRQRQSLQK SWAALIASII LLFPANLLPI SIIYVNGART
EDTIFSGILS LASGNVPVAL VVFIASILVP FTKVMVLFGL LVSIHLRSEA NIMMRMKMLR
VIRWIGRWSM LDLFVIALTM SLVNRDQLLA FTMGPAAFYF GAAVILTILA VEWLDSRLMW
DNTDVE
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