| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1814 |
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| Symbol | |
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| ID | 8132757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2098780 |
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| End bp | 2099997 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644865103 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_003017391 |
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| Protein GI | 253688201 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.877922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTCAT TTGTTGCCCG CCAACCTATT TTAAATCAAC ACCTCCAAAC CGTTGCCTAC
GAACTCCTTT TTCGCATGGA CGTCACCAAT AGATTTCCTG ACGTCAGTCC TGAGTTTGCA
ACCGCACAGC TCATTTCCGA TCAATTTTTA ACTAATCCGC TGACAAAATC CGTGGCTGAG
CAGCCTTACT ATATTAATTT TCCCCACCAG ATGCTGATCA ACGGCCAGGC TGAAGTCCTG
CCACAGGAAA AGGTCGTTAT CGAGATTCTG GAAAATGCGA TCCCCGACAA CGATCTCTTT
GTCGCCGTAA AAAAACTAAA AAGAAAAGGC TTCAGAATTG CACTGGATGA TTTTTCGATG
GATTCAGATT GGGATCGATT TTTGCCTTAC ATCGACATCA TCAAATTTGA TTTAACCTTG
TCGACGTTTG GTGATATTGA AAATTTCATC AACAGAACTG CACAGCGTAA ATTAACCTAT
CTGGCCGAAA AAGTAGAAAC ACATGAGCAA TATCTGCAAA GCAAAAAGCT GGGTATCTCA
CTATTTCAGG GGTATTTTTT CAGCCATCCA GAGATGATCA GATCGAAAAA ACTGGTCAAT
AACTCCAGCA ATACCATCAG GCTACTGAGA GAAGTCAATA AGCCTGAAAT CAACTATGCC
ACGATCGAAG AATTGGTCTG TGCCGATCTC TCGCTTTATT ATAAATTGAT GCGCCACATC
ACCAATATCA AATACAACAC CCGCTTTGGC ATTACCGCGA CATCAATGTC TTTCCGTTCC
ATGGCAATGC TCCTTGGGCA ACGGGAGCTT AAACGTTTTG TCTCATTGAT CAGCATTACT
AATAGTAACG AAAATAAACC CAGCGAGCTT TATCGTACCA GCTTAATTCG CGCCAGATTC
TTCGAATTAT TGTATGCCTC TTTTAATGTG AAGGAGGATA CCACCGATGC ATTTTTGTGC
GGATTATTGT CACTGCTTGA TGCCGTATTA GATTCGCCGA TGCCTCTATT GCTCTCGCAA
ATCGCCCTAT CAGAAAAAAT TAACCAGAGC TTATTAGAAA ATACTGGTGA GCTGGCGGTT
TATCTGACGT TAATTTCTAA ATATGAACAA CAAGAATGGG AAGAACTTGA GCAACTTTTA
ATCCAACTGG GTATTGATGA AGAAAACTTC TTCACCATGA TCATGGAGGC AACACAGTGG
GCGGATGAGA TTTTATAA
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| Protein sequence | MYSFVARQPI LNQHLQTVAY ELLFRMDVTN RFPDVSPEFA TAQLISDQFL TNPLTKSVAE
QPYYINFPHQ MLINGQAEVL PQEKVVIEIL ENAIPDNDLF VAVKKLKRKG FRIALDDFSM
DSDWDRFLPY IDIIKFDLTL STFGDIENFI NRTAQRKLTY LAEKVETHEQ YLQSKKLGIS
LFQGYFFSHP EMIRSKKLVN NSSNTIRLLR EVNKPEINYA TIEELVCADL SLYYKLMRHI
TNIKYNTRFG ITATSMSFRS MAMLLGQREL KRFVSLISIT NSNENKPSEL YRTSLIRARF
FELLYASFNV KEDTTDAFLC GLLSLLDAVL DSPMPLLLSQ IALSEKINQS LLENTGELAV
YLTLISKYEQ QEWEELEQLL IQLGIDEENF FTMIMEATQW ADEIL
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