| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1709 |
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| Symbol | |
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| ID | 8132651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1969400 |
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| End bp | 1971064 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864997 |
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| Product | hypothetical protein |
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| Protein accession | YP_003017286 |
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| Protein GI | 253688096 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.137419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCTGG AAAGTATTGA AATCCTGGGA TTTCGGGGAA TCAATCGTCT GTCGCTGGCG
TTGGACGAGA ATAACGTACT GATTGGTGAG AACGCCTGGG GGAAATCGAG CCTGCTGGAT
GCGCTCTCGC TGCTGCTGGC ACCGACATTG CCGCTTTATC ATTTTGATAT GCAGGATTTT
CACTTCACTC CGGGGGATGA AAATAGTCGG GAAAAGCATC TTCAGATTAT TTTCACGTTT
TGTGAAACCG CACCTGGCCA CCATTTATCT CTGCGCTACC GTTCGCTTAG CCCTGTTTGG
GTGGAAGGCG AGGCATCGCT ATACCGCATT TTCTATCGGC TGGAAGGTGA GGTGGACGAA
AGCCAGTCGG TTTTTACCTG GCGTAGCTTT CTGGACGCAG ACGGGCACCC GATACCGCTG
GATGATATTG ATGAACTGGC CAGAGAGATT ATCCGCCTGC ATCCGGTGCT GCGGCTGCGC
GACGCGCGTT TTATGCGGCG TCTGCGTTCC GGAACGCTGG CGGCGACGTT AGATAACAGT
AATGAAAAGC TGGCCCAGCA GTTTGAGCAA CTGATGCGCG AGCTGGCGCA AAATCCGCAG
AAGCTGACGG ATAAAGAGTT GCGGCATGGT CTGGTGGCGA TGCGGCAATT GCTGGAGCAC
TATTTTTCCG AGCAGAATGC CACGGGGAAC GACCGACGCC ACCATCGTCA TGCGCGAGCA
CACAACGGTA AATCGTGGCG CTCGCTGGAC AATATCAACC GTCTGATTGC CGACCCAAAT
AGCCGCAGCC GGCGCATTAT CCTGCTGGAG CTATTTTCTA CGCTGTTACA GGCGAAAGGG
TCGGTAGCGC TGGATCCGCA TGCCCGTCCG CTTTTGCTGA TTGAAGACCC CGAAACCCGC
CTGCACCCGA TTATGCTATC CGTCGCCTGG GGGCTTCTGG TGCAGTTGCC GCTCCAAAAA
GTCACGACAA CGAATTCGGG AGAACTGCTG TCGCTGGTGC CGATGGAGCA CGTGTGCCGT
CTGGTGCGGG AATCTTCACG GGTTGCGACA TACCGCATTG GTCGTCAGGG CATGAGTGCG
GAAGACAGCC GGCGCATTGC GTTTCATATT CGTCTGAATC GACCCGCTTC ACTTTTCGCG
CGTTGCTGGC TGCTGGTGGA GGGGGAAACC GAAGTCTGGA TGCTGAATGA ACTGGCGCGC
CAATGTGGGC ACCATTTTGA GGCGGAAGGG GTGAAGGTGA TTGAGTTTGC CCAATCCGGG
CTCCGGCCAT TGCTGAGGTT CGCACGGCGT ATGGGGATTG AATGGCATGT GCTGGTCGAT
GGCGACGACG CGGGGAAAAA GTATGCCGCG ACGGCGAAAA GCATGTTAAC CGTTCAGGAC
GAGAGCGAGC GCGATCACCT GACCGTCTTG CCCGCATCGG ACATGGAACA CTATATGTAT
CGTGAGGGGT TCAGCCACGT TTATCACCGC ACCGCGCAGT TGCCGGAGAA AGTGCCGCTA
TCGATGCACA AAATCATCAT CAAGGCGATT CATCGTTCAT CCAAGCCCGA TCTGGCGATT
GAGGTGGCGA TGGAGGCAGC AGCGATGGGC AGCGATGCAA TCCCACCGCT TATACGCAGC
ATGTTCTCCC GCGTCCTGTG GCTGGCCCGC GGACGTGCGG ATTAG
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| Protein sequence | MHLESIEILG FRGINRLSLA LDENNVLIGE NAWGKSSLLD ALSLLLAPTL PLYHFDMQDF
HFTPGDENSR EKHLQIIFTF CETAPGHHLS LRYRSLSPVW VEGEASLYRI FYRLEGEVDE
SQSVFTWRSF LDADGHPIPL DDIDELAREI IRLHPVLRLR DARFMRRLRS GTLAATLDNS
NEKLAQQFEQ LMRELAQNPQ KLTDKELRHG LVAMRQLLEH YFSEQNATGN DRRHHRHARA
HNGKSWRSLD NINRLIADPN SRSRRIILLE LFSTLLQAKG SVALDPHARP LLLIEDPETR
LHPIMLSVAW GLLVQLPLQK VTTTNSGELL SLVPMEHVCR LVRESSRVAT YRIGRQGMSA
EDSRRIAFHI RLNRPASLFA RCWLLVEGET EVWMLNELAR QCGHHFEAEG VKVIEFAQSG
LRPLLRFARR MGIEWHVLVD GDDAGKKYAA TAKSMLTVQD ESERDHLTVL PASDMEHYMY
REGFSHVYHR TAQLPEKVPL SMHKIIIKAI HRSSKPDLAI EVAMEAAAMG SDAIPPLIRS
MFSRVLWLAR GRAD
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