Gene PC1_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1702 
SymbolartP 
ID8132644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1961405 
End bp1962154 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content53% 
IMG OID644864990 
Productarginine transporter ATP-binding subunit 
Protein accessionYP_003017279 
Protein GI253688089 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4161] ABC-type arginine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0357255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTC AATTCTTACG CATGAGTATT CAACTAAACG GCATTAACTG TTTCTACGGC 
ACATACCAGG CGCTATTTGA TATCACCCTC GATTGTCCTG CGGGTGAAAC GCTGGTTCTT
CTTGGCCCCA GCGGAGCAGG AAAGAGCTCG CTGATACGCG TTCTTAACCT GTTGGAAATG
CCGCGCTCTG GCACGCTTTC CATCGCCGGT AATCAGTTTG ATTTTCAGCG CACGCCATCC
GATAGCGCGA TCCGTGAGTT GCGTCAGAAC GTCGGGATGG TGTTCCAACA ATACAATTTA
TGGCCGCATC TGACCGTCGC GCAAAACCTG ATTGAAGCGC CCTGCCGCGT GTTGGGGCTG
AGTAAAGAAG AAGCTAAAGC ACGGGCAGAT AAACTGCTGA CGCGTCTGCG CCTCAATGAC
TTTGCCGATC GCTTTCCCCT TCATCTGTCT GGCGGGCAGC AACAGCGTGT TGCGATTGCG
CGTGCGCTGA TGATGGAACC TCAGGTGCTG TTATTTGATG AGCCCACCGC CGCACTGGAT
CCAGAAATTA CCGCTCAGGT CGTTAACATC ATCCGTGAAT TGGCGCAAAC CGGCATCACG
CAGGTGATTG TGACCCACGA AGTCGAATTT GCCCGTAAAA CGGCCAGCCG GGTAGTGTAT
ATGGAAAACG GCCGCATCGT TGAACAGGGG GATGCGACGC ACTTTACCCA GCCGCAGACG
CCTGAATTCG CTGGTTATTT GTCACATTGA
 
Protein sequence
MSIQFLRMSI QLNGINCFYG TYQALFDITL DCPAGETLVL LGPSGAGKSS LIRVLNLLEM 
PRSGTLSIAG NQFDFQRTPS DSAIRELRQN VGMVFQQYNL WPHLTVAQNL IEAPCRVLGL
SKEEAKARAD KLLTRLRLND FADRFPLHLS GGQQQRVAIA RALMMEPQVL LFDEPTAALD
PEITAQVVNI IRELAQTGIT QVIVTHEVEF ARKTASRVVY MENGRIVEQG DATHFTQPQT
PEFAGYLSH