| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1645 |
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| Symbol | |
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| ID | 8132587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1893723 |
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| End bp | 1895531 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864933 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003017222 |
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| Protein GI | 253688032 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.819399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAC GCGTTATCGC TGCCGTATTG CTTTGCACGG CCCATTTTGG CGTGCAGGCT
GAAACGATTG AAAACAGCAC CCGCTTTGCA CTTTTAGGTG AACCCAAATA TGCCGAGAAC
TTCAGCCATT TTGACTATGT CAATCCTGAT GCTCCCAAGG GCGGCAGCAT TACCCTCAGC
GCACTAGGTA CCTTTGATAA TTTCAACCGT TTCGCACTAC GTGGCGTAGC CGCAGCCCGT
ACGGAACGGC TCTACGATTC GCTTTTCACT TCTTCTGATG ACGAACCCGG CAGCTATTAT
CCGCTGGTCG CGCTGACGAC ACGCCATTCG GCGGATTTCC GCTGGATTGA AATAGAGATG
AATCCCAAAG CTCGCTTTCA TGACGGCTCA CCGATCACCG CAGCTGACGT GGCATTCACC
TATAACATGT TTATGACACA GGGCGTGCCT CAGTTCCGCA TCTATTTTAA AGACGTTACC
GCCAAAGCGA TTGCACCGCT GACCGTACGT TTTGATTTTC CCGTGTCCGA CAAAAACCGC
ATGTTCAGCT TGTTGACTCT GCCTATCATG CCGGAGAAGT TCTGGAAGAA TCATAAATTT
AGCGAGCCGC TATCGTACCC ACCACCCGCC AGTGGCCCTT ATCGCATCAC CGCCTATAGA
ACAGGGCAAT ATGTCACCTA TTCCCGCGTG AAGGACTACT GGGGCGCCGA TCTGCCGGTC
AATAAAGGTC AGTACAATTT CGATAAAATC CGCTACGACT ACTATCTGGA CGACAGCGTC
GCACTAGAAG CCTTTAAAGC GGGTGCCTTC GATCTGCGAG AGGAAGGATC GCCCAAAAAC
TGGGCGACCC AATATCAGGG TGGCAACTTT GCGCGTGGCT ACATTATTAA GCAGGATCAG
GTTAATCAAT CCGCCCAGGA TACGCGTTGG CTAGCATTCA ATATCCAGCG GCCGCTGTTC
CAGGATCGTC GCGTACGTCA GGCGTTAGCC CTGGCATTTG ACTTCAACTG GATGAACAAG
GCGCTGTATT ACAACGCCTA TCAACGTACC GACAGCTATT TCCAAAACAC CGAGTATGCC
GCTAAAGGCG AACCCACCGC TGAGGAATTG GCCTGGCTGA CGCCGCTCAA AGACAAAGTA
CCCGCCGAGG TCTTTGGTCC CAGCTATCAA CCGCCCTCCT CCGATGGCAG CGGCTATGAC
CGACAAAATT GGCTTAAGGC ACTCAAGCTG CTGGAAGAGG CGGGTTGGGT ATTGAAAGAT
CAGAAGCTGG TTAGTAGCAA AACCGGGCAG CCGTTTACGT TTGAGCTGCT GTTGCCAAGC
GCAGGTAACT CGCAGTATGT CCTGCCTTTT CAGCAGAGCC TGAAAAAATT GGGCATCACC
ATGAACGTGC GTAATATCGA TAGCACGCAG TTCAACAACC GTATTCGTAA GCGAGATTTC
GATATGACGG CAATGGTGTA CCCTGCTTTC CTCTACCCCA GTGACAACCT GCAAATGTAC
TGGAGCTCTC AGTACATCAA TTCAAGCTAC AACAGACCCG GCGTCAACGA TTCCGCGATT
GATTCACTCG TCGAGGAAAT CGTTAAGCAC CAGGGGCAAA AAGCACCGCT ACTGTCATTA
GGCCGCGCGT TGGACAGGGT GCTGACCTGG AATCAGTTCA TGATTCCGAT GTGGTATTCC
AATCATGACC GCTTTGCCTA TTGGAACAAG TTTGCCATGC CTGCTGTACG CCCGGCCTAT
TCGCTAGGTT TTGATGGCTG GTGGTTCGAT ACCCAACAGG CGGCGACGCT GCCCGCAGAG
CGACGTTAA
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| Protein sequence | MLKRVIAAVL LCTAHFGVQA ETIENSTRFA LLGEPKYAEN FSHFDYVNPD APKGGSITLS
ALGTFDNFNR FALRGVAAAR TERLYDSLFT SSDDEPGSYY PLVALTTRHS ADFRWIEIEM
NPKARFHDGS PITAADVAFT YNMFMTQGVP QFRIYFKDVT AKAIAPLTVR FDFPVSDKNR
MFSLLTLPIM PEKFWKNHKF SEPLSYPPPA SGPYRITAYR TGQYVTYSRV KDYWGADLPV
NKGQYNFDKI RYDYYLDDSV ALEAFKAGAF DLREEGSPKN WATQYQGGNF ARGYIIKQDQ
VNQSAQDTRW LAFNIQRPLF QDRRVRQALA LAFDFNWMNK ALYYNAYQRT DSYFQNTEYA
AKGEPTAEEL AWLTPLKDKV PAEVFGPSYQ PPSSDGSGYD RQNWLKALKL LEEAGWVLKD
QKLVSSKTGQ PFTFELLLPS AGNSQYVLPF QQSLKKLGIT MNVRNIDSTQ FNNRIRKRDF
DMTAMVYPAF LYPSDNLQMY WSSQYINSSY NRPGVNDSAI DSLVEEIVKH QGQKAPLLSL
GRALDRVLTW NQFMIPMWYS NHDRFAYWNK FAMPAVRPAY SLGFDGWWFD TQQAATLPAE
RR
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