| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1533 |
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| Symbol | |
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| ID | 8132474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1787873 |
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| End bp | 1788805 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644864822 |
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| Product | tRNA-dihydrouridine synthase C |
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| Protein accession | YP_003017112 |
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| Protein GI | 253687922 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGTTC TGCTTGCCCC GATGGAAGGG GTTCTCGACT CATTAGTGCG GGAACTGCTG
ACCGAAGTAA ATGATTATGA CCTGTGTGTC ACCGAGTTCT TACGCGTGGT GGATCAGTGT
CTGCCGGTTA AGTCCTTTTA TCGTCTTTGC CCGGAGCTAC ACCATGCCAG CCGCACGCCG
TCTGGTACGC TGGTGCGTGT ACAGTTGCTG GGGCAATATC CGCAGTGGCT GGCGGAAAAT
GCCGCGCGGG CGGTGGAACT GGGTTCGTAT GGCGTCGATC TTAACTGCGG CTGCCCGTCG
AAGCTGGTGA ACGGCAGCGG GGGCGGGGCG ACGCTGTTGA AAGATCCCGA GCTGATTTAT
CAGGGCGCGA AAGCCATGCG TGAGGCGGTG CCTGCCCATT TGCCGGTCAC GGTGAAAATT
CGGCTGGGCT GGGATTCCGG CGATCGCCAG TTTGAAATTG CCGATGCGGT GCAGCAGGCG
GGCGCAAGCG AACTGGTCGT GCATGGCCGT ACGAAAGAAG ACGGTTATAA AGCCGAATGC
ATTAACTGGC AGGCGATAGG CAAAATCCGC CAGCGGTTGC GGATTCCGGT GATCGCCAAC
GGCGAAATCT GGGACTGGCA GAGTGCGCAG GACTGTATGG CGACAACGGG GTGCGACGCA
ATTATGCTCG GACGGGGCGC GCTAAACGTG CCGAACCTGA GTCGCGTCAT TAAGTATAAC
GAACCGCGTA TGCCGTGGCC TGAGGTCATG CTGCTGCTAC AAAAATATGT GCAGTTGGAA
AAGCAGGGCG ACACCGGGAT GTATCACGTC GCACGTATCA AACAGTGGCT CGGCTATTTG
CGTAAAGAAT ACGATGACGC CACCGAGTTA TTCAGCGAGA TTCGCACCCT GAAAACGTCG
GCGGACATCG CACGCGTGAT CGGTGAGCCG TAG
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| Protein sequence | MRVLLAPMEG VLDSLVRELL TEVNDYDLCV TEFLRVVDQC LPVKSFYRLC PELHHASRTP
SGTLVRVQLL GQYPQWLAEN AARAVELGSY GVDLNCGCPS KLVNGSGGGA TLLKDPELIY
QGAKAMREAV PAHLPVTVKI RLGWDSGDRQ FEIADAVQQA GASELVVHGR TKEDGYKAEC
INWQAIGKIR QRLRIPVIAN GEIWDWQSAQ DCMATTGCDA IMLGRGALNV PNLSRVIKYN
EPRMPWPEVM LLLQKYVQLE KQGDTGMYHV ARIKQWLGYL RKEYDDATEL FSEIRTLKTS
ADIARVIGEP
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