| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1524 |
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| Symbol | |
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| ID | 8132465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1777745 |
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| End bp | 1778734 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644864813 |
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| Product | transport system permease protein |
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| Protein accession | YP_003017103 |
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| Protein GI | 253687913 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.60959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGACAGA GCATCGTGAC GGCAGCGGGT ATCGCATTAT TGCTGCTGAG TATGGTCGCC
AGCCTGATGC TGGGGCAGAC GACGATTTCA TTTGGCACCG TATACAACGC GCTGTTCCAT
TACAATCCAG AGCAGATCGA CCAGATACTG GTGTTGACGA CCCGCCTGTC GCGAACAGTG
ATTGCCATCG TTGTTGGCGC CAGCCTTGCT GTTGCCGGAG CCTTAATGCA GGCGTTGACG
CGTAATCCGT TGGCTTCACC GGGGATATTC GGGATTAACG CCGGGGCAAT GTTTGCCATC
GTCCTGCTGT CCTCACTGTT TACCTTTTCC TCGCAGACCG CACTGGCGTG GACGGCCTAT
TTGGGTGCCG CCGTTGCGGG CGTCATGGTG TATGTGCTGG GTACGCTCGG CAATGCGCGT
TCCAGCCATT TACGCATTGT GCTGGCCGGT GCCGCGATTA GCGCACTGTT TATTTCGTTT
ACGCAGGCGC TACTGGTGAT CAATCAAGAC GGGCTGGATA GCATGTTGTT CTGGCTGGCC
GGTTCGGTGT CTGGCCGCAG CCTGTCGATG CTGTTACCCC TCCTGCCGTA CTTTGTCATG
GCGCTGTTCC TTACGCTGCT GTTAGCGCGT CACCTGAATA TTCTGGTGGC AGGCGACGAG
ATCGCTAAAG GGTTAGGGCA GCGAACGGCG CTGGTGCGTG CGTTGTCCGG GCTCTGTGTC
ATCGGGCTGG CGGGTGGCGC GGTGGCAATC GCCGGAAATA TCGGTTTTGT CGGGCTGATT
GTGCCGCATA TTGTGCGTCG CGTGCTATCT GCCGATCACC GCTGGTTGCT ACCCGGCTGC
GCTGTTTTCG GTGCCACGCT GTTGCTGCTG GCTGATATCG CCTCGCGTTT GCTGATCGTA
CCGCAGGAAG TACCGGTTGG GGCGATGACG GCGCTGTTGG GCGCACCGTT CTTCATTTAT
CTGGCGAGAA AGGGGATGCG GCATGGGTAA
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| Protein sequence | MRQSIVTAAG IALLLLSMVA SLMLGQTTIS FGTVYNALFH YNPEQIDQIL VLTTRLSRTV
IAIVVGASLA VAGALMQALT RNPLASPGIF GINAGAMFAI VLLSSLFTFS SQTALAWTAY
LGAAVAGVMV YVLGTLGNAR SSHLRIVLAG AAISALFISF TQALLVINQD GLDSMLFWLA
GSVSGRSLSM LLPLLPYFVM ALFLTLLLAR HLNILVAGDE IAKGLGQRTA LVRALSGLCV
IGLAGGAVAI AGNIGFVGLI VPHIVRRVLS ADHRWLLPGC AVFGATLLLL ADIASRLLIV
PQEVPVGAMT ALLGAPFFIY LARKGMRHG
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